Javad Aminian @javadamnd

@UCBerkeley | Computational biology | Graphing gut gossip | Simulating symbiosis; Engineering insight. Joined August 2024

Tweets

4
Followers

5
Following

107
Likes

22

Microbes.info @MicrobesInfo

4 months ago

0 1 1 73 0

Berkeley Engineering @Cal_Engineer

4 months ago

Berkeley researchers have developed an advanced computational platform, called MetaBiome, that simulates how different species of gut bacteria grow and interact over time, offering new insights into the microscopic world inside us! engineering.berkeley.edu/news/2025/04/t…

2 4 14 4K 3

bioRxiv Microbiology @biorxiv_micrbio

9 months ago

MetaBiome: A Multiscale Model Integrating Agent-Based Modeling and Metabolic Networks Reveals Spatial Regulation in Mucosal ... biorxiv.org/cgi/content/sh… #biorxiv_micrbio

0 2 4 827 1

Student organization connecting and representing graduate students from @UCBerkeley interested in biotechnology

Biotech @Berkeley @BerkeleyBiotech

162 Followers 331 Following Student organization connecting and representing graduate students from @UCBerkeley interested in biotechnology

professor of bioengineering and mechanical engineering @ucberkeley; mechanobiology ; computational precision health and microbiome

Mohammad R. K. Mofrad @mofrad

372 Followers 2K Following professor of bioengineering and mechanical engineering @ucberkeley; mechanobiology ; computational precision health and microbiome

The Didonna Lab aims at understanding the mechanistic connection between aberrant immune responses and neurodegenerative processes in chronic human diseases.

Didonna Lab @DidonnaLab

305 Followers 600 Following The Didonna Lab aims at understanding the mechanistic connection between aberrant immune responses and neurodegenerative processes in chronic human diseases.

Fateme Montazeri @FatemeMonta3eri

217 Followers 281 Following MD-MPH | Ophthalmology Research Fellow@UCDavis@ucd_eyecenter

Helen Hay Whitney Fellow with @SeanMegason @HMS_SysBio (PhD w/ Julie Theriot). Biophysicist and quantitative cell biologist, integrating theory and experiment.

Rikki Garner @rikkigarner

1K Followers 2K Following Helen Hay Whitney Fellow with @SeanMegason @HMS_SysBio (PhD w/ Julie Theriot). Biophysicist and quantitative cell biologist, integrating theory and experiment.

GenBio AI @genbioai

8K Followers 0 Following Building the World’s First AI-Driven Digital Organism (AIDO). We're hiring: https://t.co/JwdGBJvhkL

bioRxiv SysBio @biorxiv_sysbio

2K Followers 0 Following

The Laboratory of Computational Metagenomics led by @nsegata

**We are hiring, get in touch if interested!**

Moderator @svetlana_up

Segata Lab @cibiocm

4K Followers 429 Following The Laboratory of Computational Metagenomics led by @nsegata **We are hiring, get in touch if interested!** Moderator @svetlana_up

The scientific editors of Cell Host & Microbe, a Cell Press journal, bring you the latest information and insights from the forefront of host-microbe research.

Cell Host & Microbe @cellhostmicrobe

27K Followers 266 Following The scientific editors of Cell Host & Microbe, a Cell Press journal, bring you the latest information and insights from the forefront of host-microbe research.

Figuring out AI @allen_ai, open models, RLHF, fine-tuning, etc
Contact via email.
Writes @interconnectsai
Wrote The RLHF Book
Mountain runner

Nathan Lambert @natolambert

56K Followers 853 Following Figuring out AI @allen_ai, open models, RLHF, fine-tuning, etc Contact via email. Writes @interconnectsai Wrote The RLHF Book Mountain runner

Tweeting and RT-ing microbiology news, articles and comments relevant to aspects on bacteria, fungi, viruses and other microbes / microorganisms. Microbes are 💪

Microbes.info @MicrobesInfo

2K Followers 508 Following Tweeting and RT-ing microbiology news, articles and comments relevant to aspects on bacteria, fungi, viruses and other microbes / microorganisms. Microbes are 💪

Fateme Montazeri @FatemeMonta3eri

217 Followers 281 Following MD-MPH | Ophthalmology Research Fellow@UCDavis@ucd_eyecenter

Associate Professor at Harvard | Faculty @Harvard @KempnerInst AI | Faculty @broadinstitute @harvard_data | @ProjectTDC @AI_for_Science

Marinka Zitnik @marinkazitnik

8K Followers 226 Following Associate Professor at Harvard | Faculty @Harvard @KempnerInst AI | Faculty @broadinstitute @harvard_data | @ProjectTDC @AI_for_Science

Professor of EECS and Statistics @UCBerkeley. Mathematical and computational biologist.

bsky handle: https://t.co/bW59tUBr8m

Yun S. Song @yun_s_song

4K Followers 226 Following Professor of EECS and Statistics @UCBerkeley. Mathematical and computational biologist. bsky handle: https://t.co/bW59tUBr8m

Mo Lotfollahi @mo_lotfollahi

12K Followers 4K Following ML for biology and drug discovery | Faculty @sangerinstitute @Cambridge_uni

PI at the Center for Computational Biology, UC Berkeley. Transcription factors. Rational protein mutagenesis. Experiments. Machine Learning. Simulations.

Max Staller @maxvstaller

906 Followers 236 Following PI at the Center for Computational Biology, UC Berkeley. Transcription factors. Rational protein mutagenesis. Experiments. Machine Learning. Simulations.

Biotech @Berkeley @BerkeleyBiotech

162 Followers 331 Following Student organization connecting and representing graduate students from @UCBerkeley interested in biotechnology

Source for Microbiome research news and information. Organizer of the Annual Translational Microbiome Conference. #microbiomecon #microbiome #microbiota

Microbiome News @microbiome_news

10K Followers 1K Following Source for Microbiome research news and information. Organizer of the Annual Translational Microbiome Conference. #microbiomecon #microbiome #microbiota

The Daily Californian @dailycal

40K Followers 774 Following UC Berkeley's independent, student-run newspaper. Established in 1871, independent since 1971. https://t.co/xNbKjkLvWL

A family of journals from @BioMedCentral that seek to unite investigators conducting microbiome research in environmental, agricultural, and biomedical arenas.

Microbiome @MicrobiomeJ

20K Followers 2K Following A family of journals from @BioMedCentral that seek to unite investigators conducting microbiome research in environmental, agricultural, and biomedical arenas.

https://t.co/4MBT0oCaCQ: the latest scientific news about #microbiota, #microbiome and #probiotics.
Register: https://t.co/6wiqYWAngo

MicrobiomePost @MicrobiomePost

3K Followers 395 Following https://t.co/4MBT0oCaCQ: the latest scientific news about #microbiota, #microbiome and #probiotics. Register: https://t.co/6wiqYWAngo

Gut Microbiota for Health by experts, for experts from medical & scientific communities.
By https://t.co/bGngsUpgkM #GMFH2025 #health #microbiota #gutmicrobiota

GutMicrobiota Health @GMFHx

35K Followers 3K Following Gut Microbiota for Health by experts, for experts from medical & scientific communities. By https://t.co/bGngsUpgkM #GMFH2025 #health #microbiota #gutmicrobiota

Joshua Blumenstock @jblumenstock

2K Followers 209 Following Associate prof at UC Berkeley

PhD @GatsbyUCL
MA Theoretical Physics @OfficialUoM @UCLA
Prev. @ZuckermanBrain @SapienzaRoma @CERN @EPFL
Creator @ArtlovesSci
Organiser of @unireps

Clémentine Dominé, ... @ClementineDomi6

3K Followers 2K Following PhD @GatsbyUCL MA Theoretical Physics @OfficialUoM @UCLA Prev. @ZuckermanBrain @SapienzaRoma @CERN @EPFL Creator @ArtlovesSci Organiser of @unireps

✍Dedicated to expanding knowledge about gut microbiota and health among the general public
🌎English, Spanish & French
By @esnm_eu

Gut Microbiota for He... @GutMicrobiotaWW

17K Followers 1K Following ✍Dedicated to expanding knowledge about gut microbiota and health among the general public 🌎English, Spanish & French By @esnm_eu

Mohammad Hossein Rohb... @MhRohban

1K Followers 400 Following Associate Professor in Computer Science @ Sharif University of Technology

Stories that inspire — and are inspired by — @UCBerkeley's brilliant community. Official account of University Development & Alumni Relations.

Berkeley Inspire @berkeleyinspire

110K Followers 6K Following Stories that inspire — and are inspired by — @UCBerkeley's brilliant community. Official account of University Development & Alumni Relations.

Highly cited, highly respected, and highly relevant, AIP's archival journals are the cornerstone of many physics collections.

AIP Publishing @AIP_Publishing

20K Followers 1K Following Highly cited, highly respected, and highly relevant, AIP's archival journals are the cornerstone of many physics collections.

Immigrant. Associate professor (microbial systems biology) at Boston College. Posting what I find interesting, important, or amusing...

Babak Momeni @bmomeni

1K Followers 1K Following Immigrant. Associate professor (microbial systems biology) at Boston College. Posting what I find interesting, important, or amusing...

News, announcements, events and resources for graduate students and the graduate community at UC Berkeley. #GoBears🐻 https://t.co/hswM5t1yQB

UC Berkeley Graduate ... @GradDivision

3K Followers 309 Following News, announcements, events and resources for graduate students and the graduate community at UC Berkeley. #GoBears🐻 https://t.co/hswM5t1yQB

Jessica Sacher, PhD @JessicaSacher

5K Followers 817 Following Scientist @Stanford | Cofounder @PhageDirectory | Host of Podovirus 🎙

Somayeh Sojoudi @somayeh_sojoudi

111 Followers 42 Following Associate Professor, EECS & ME, UC Berkeley

Saeed Shoaie @SaeedShoaie

178 Followers 230 Following Systems Biologist, Interested in Microbiome

Ecology, Evolution, & Genomics of Mutualism; Microbiomes; Associate Professor University of Miami; https://t.co/rh8vKDZSRD

Michelle Afkhami @MichelleAfkhami

844 Followers 217 Following Ecology, Evolution, & Genomics of Mutualism; Microbiomes; Associate Professor University of Miami; https://t.co/rh8vKDZSRD

Aaron Garoutte @AaronGaroutte

55 Followers 58 Following Microbial Ecology PhD Student at Michigan State University

Oriane Moyne @OrianeMoyne

90 Followers 199 Following Microbial sociologist | Surfing USA at University of California, San Diego | Zengler lab

Systems biologist focusing big data analytics for biotherapeutic development and discovery of disease mechanisms. CMM, CCRC, UGA

Nathan Lewis @Nathan_E_Lewis

2K Followers 840 Following Systems biologist focusing big data analytics for biotherapeutic development and discovery of disease mechanisms. CMM, CCRC, UGA

Co-founder, CTO @ Sinopia Biosciences (https://t.co/0b4Pa6tr6J); NINDS, NIGMS, NHLBI, and MJFF funded PI; all musings are my own; proud UCSD alum

Aarash Bordbar @aa_bordba

124 Followers 163 Following Co-founder, CTO @ Sinopia Biosciences (https://t.co/0b4Pa6tr6J); NINDS, NIGMS, NHLBI, and MJFF funded PI; all musings are my own; proud UCSD alum

Science + lamentations about politics

PI of the Advanced Mammalian Cell Engineering Lab at the Technical University of Denmark

Also https://t.co/DzJ0slBD5N

Hooman Hefzi @hhefzi

117 Followers 165 Following Science + lamentations about politics PI of the Advanced Mammalian Cell Engineering Lab at the Technical University of Denmark Also https://t.co/DzJ0slBD5N

Hamed Pirsiavash @hpirsiav10

389 Followers 225 Following Associate Professor at the University of California Davis

Paria Rashidinejad @paria_rd

168 Followers 296 Following Assistant Professor @USC ⠀ ⠀ ⠀ ⠀ ⠀ ⠀ ⠀ ⠀ ⠀ ⠀ ⠀ ⠀ Research Scientist @AIatMeta FAIR, GenAI⠀ ⠀ ⠀⠀ ⠀ ⠀ PhD @berkeley_ai @CHAI_Berkeley

Postdoc @Stanford Microbiology and Immunology| Ph.D. @UCLA Environmental Microbiology| MS @UCBerkeley | Gut Microbiome, Microbes, Enzyme, Health, Environment

Yifan Gao @YifanGao15

986 Followers 997 Following Postdoc @Stanford Microbiology and Immunology| Ph.D. @UCLA Environmental Microbiology| MS @UCBerkeley | Gut Microbiome, Microbes, Enzyme, Health, Environment

Associate Professor of Neurology and Bioengineering @UCSF. Previously @AllenInstitute, @UCBerkeley EECS, @neuralink & @FlatironCCB. ML and comp neuro researcher

Reza Abbasi-Asl @Reza_Abbassi

960 Followers 795 Following Associate Professor of Neurology and Bioengineering @UCSF. Previously @AllenInstitute, @UCBerkeley EECS, @neuralink & @FlatironCCB. ML and comp neuro researcher

Scientist (PI). Doing fundamental research in #Materials and #Electrochemistry. Ex-PSI. Ex-Stanford. Run a Podcast (on Youtube).

Andrew Akbashev @Andrew_Akbashev

16K Followers 580 Following Scientist (PI). Doing fundamental research in #Materials and #Electrochemistry. Ex-PSI. Ex-Stanford. Run a Podcast (on Youtube).

Official NASA account. Exploring the universe, advancing science, and inspiring the next generation of explorers.

Verification: https://t.co/8nok3NP4PW

NASA @NASA

87.8M Followers 154 Following Official NASA account. Exploring the universe, advancing science, and inspiring the next generation of explorers. Verification: https://t.co/8nok3NP4PW

Salmonn Talebi @SalmonnTalebi

6 Followers 70 Following

Mohammad R. K. Mofrad @mofrad

372 Followers 2K Following professor of bioengineering and mechanical engineering @ucberkeley; mechanobiology ; computational precision health and microbiome

We are the NorthEast UK Synthetic Biology network, a community of researchers interested in SynBio. Email: info@neuksynbio.com

NEUK_SynBio @neuk_synbio

1K Followers 531 Following We are the NorthEast UK Synthetic Biology network, a community of researchers interested in SynBio. Email: [email protected]

$Core Investigator @arcinstitute | Associate Professor @Ucsf_Biochem @UCSFurology @UCSFCancer | {Computational, Cancer, RNA} biologist$

Hani Goodarzi @genophoria

6K Followers 1K Following Core Investigator @arcinstitute | Associate Professor @Ucsf_Biochem @UCSFurology @UCSFCancer | {Computational, Cancer, RNA} biologist

Associate Professor at University of Tehran (@UnivOfTehran); interested in #Bioinformatics, #SystemsBiology and #MetabolicEngineering

Sayed-Amir Marashi @_marashi_

183 Followers 465 Following Associate Professor at University of Tehran (@UnivOfTehran); interested in #Bioinformatics, #SystemsBiology and #MetabolicEngineering

Ali R. Zomorrodi @arzomorrodi

364 Followers 902 Following Assistant Professor at @harvardmed, @mghfc, and @MGH_Mucosalists. #Microbiome, #AI in #medicine, #Metabolism, #Nutrition

Join us in discovering how generative AI can revolutionize protein research, RNA analysis, molecular design, drug discovery, and more.

GenBio Workshop @ ICM... @genbio_workshop

740 Followers 5 Following Join us in discovering how generative AI can revolutionize protein research, RNA analysis, molecular design, drug discovery, and more.

310.ai @310ai__

847 Followers 9 Following End2End AI Protein Design

CSO https://t.co/hgiMCBxCXJ. AI/ML protein design expert. According to ChatGPT: writing the future of biology — one protein at a time :)

Kathy Y. Wei, Ph.D. @KathyYWei1

4K Followers 77 Following CSO https://t.co/hgiMCBxCXJ. AI/ML protein design expert. According to ChatGPT: writing the future of biology — one protein at a time :)