Joshua Cooper @jthomascooper
Phycologist, Diatoms, Aquatic and Microbial ecologist, and dabbler of bioinformatics. Associate Professor Northern Kentucky University. Tweets are my own. Highland Heights, KY Joined July 2013-
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Joshua Cooper retweeted
Very happy to get this paper published in @NatureEcoEvo on how divergent selection and plasticity promotes reproductive isolation in the early stage of speciation. Thanks to 1th author, former postdoc @bjmjarrett for this excellent collaboration: nature.com/articles/s4155…
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Joshua Cooper retweeted
Only 1 week left to apply for both advertised researcher positions in my new lab! If you're excited about #microbial #eukaryotes and #ecological #interactions, don’t miss the deadline - spread the word! For more info, visit my website: kennethdumack.de
Joshua Cooper retweeted
Exciting news! Our perspective paper on resilience and tipping points is now out! We outline key principles to guide future research on these critical topics, from dynamical systems to real-world applications. Read -iopscience.iop.org/article/10.108… #Resilience #TippingPoints #Ecology
Joshua Cooper retweeted
Gregg is a former Marine and Forest Service ranger. He's saved the lives of hikers dangling off a cliff or going through cardiac arrest, and he's bravely fought forest fires to save small rural towns. 100% of his salary is paid by WA state. Elon fired him. Share his story.
Joshua Cooper retweeted
Setting new boundaries of 16S rRNA gene identity for prokaryotic taxonomy biorxiv.org/content/10.110…
Joshua Cooper retweeted
Our new paper led by Will Boulton just out @ScientificData Significant team effort including @ueaenv @MOSAiCArctic @jgi @UEAResearch @EarlhamInst @richardmleggett and many more! Metagenome-assembled-genomes from the central #Arctic Ocean nature.com/articles/s4159…
Joshua Cooper retweeted
Many people talk about the 'Golden Age of Antibiotics' but I hadn't seen it visualized properly. How abundant was antibiotic development during that time period? How many types of antibiotics were developed? So I visualized it myself!
Joshua Cooper retweeted
Excited to share GenomeFISH: genome-based fluorescence in situ hybridisation for strain-level visualisation of microbial communities. @CMR_QUT @S_J_Mc @donovan_parks @James_Volmer @wwood @askinnermcinnes @eilishmcm doi.org/10.21203/rs.3.…
Joshua Cooper retweeted
NEW preprint!🥳 Orthogroups are a prerequisite for comparative genomics and Tree of Life inquiries Introducing #OrthoHMM, software that improves orthogroup inference, which may refine our understanding of genome evolution and the Tree of Life 🔗 tinyurl.com/4s9mwxz6
Joshua Cooper retweeted
Do you know that I share my entire #DataAnalytics and #Geostatistics university course free for all online?! All my lectures are organized on #YouTube with links to: 1. well-documented demonstration #Python workflows, 2. interactive dashboards 3. datasets for demonstrations 4.…
Joshua Cooper retweeted
I’m stoked to create interactive #Python dashboards—powerful tools for teaching #DataScience! Explore my #GitHub repository featuring 70 interactive dashboards, designed to help you learn by doing: 👉 github.com/GeostatsGuy/Da… Also, check out my YouTube playlist for step-by-step…
Joshua Cooper retweeted
Reminder I'm recruiting a graduate student to join the @OU_Paleo lab in fall '25. My lab uses fossils, fieldwork, & statistical phylogenetic methods to study macroevolutionary processes in marine invertebrates, especially echinoderms. Please share & feel free to reach out!
Joshua Cooper retweeted
@ATinyGreenCell Here you go. For some reason, it is missing the concentration of the KOAc, which should be 5M. Protocol works well for old or young tissue. Pretty non-toxic, so good for undergrads, and cheap. Also we use 2 BBs now. bio-protocol.org/exchange/prepr…
Joshua Cooper retweeted
A river of resistant genes uncovered by metagenomics This Genome Watch discusses the use of metagenomic sequencing to investigate resistome dynamics in river ecosystems and their associations with the mobilome & microbiome, underscoring the role of rivers as reservoirs of ARGs
Joshua Cooper retweeted
Poplar: A Phylogenetics Pipeline biorxiv.org/content/10.110… 🧬🖥️🧪 github.com/sandialabs/pop…
Joshua Cooper retweeted
Speciation-by-Extinction academic.oup.com/sysbio/article…. @systbiol
Joshua Cooper retweeted
How to write an excellent Review article @natrevbioeng @Nature #PhD #PhDlife #academics #AcademicChatter #AcademicTwitter #Postdocs #Research #Science
Joshua Cooper retweeted
We're hiring a lab technician to help with high-throughput culturing and other aspects of our research. Please help spread the word. Find out more and apply using the link below. Requisition ID: REQ20156462 usccareers.usc.edu/job/los-angele…
Joshua Cooper retweeted
🚨 NEW PAPER ALERT! 🚨 Ever since the OG, Darwin, evolutionary biologists have been puzzled by the potential benefits females get by choosing "attractive" males. Well, good news Chuck, my grad school buddy Doug Barron and I figured it out today in @ASNAmNat! 😜 🧵 1/8
Joshua Cooper retweeted
#MetagenomicsMonday 🧬 Combining multi-taxon palaeogenomes and sedimentary ancient DNA data can reveal ecosystem-wide changes over time! 🧬 royalsocietypublishing.org/doi/10.1098/rs…
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