European Virus Bioinformatics Center @EVirusBioinfC
Bringing together the excellence of virology and bioinformatics. Tools: https://t.co/0cuGjrVUv1 Meeting: #ViBioM2024 evbc.uni-jena.de Jena, Germany Joined March 2017-
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Investigating evolutionary mechanisms behind viral #hostjumps using comprehensive genomic data: ✨humans are sources and recipients of viral #spillover. 📄 doi.org/10.1038/s41559… 👤 EVBC member: @BallouxFrancois #EVBCpublications #viralevolution
NMR backbone assignments of #siderocalin for mouse: ✨ valuable data for structure-based #DrugDiscovery ✨ secondary structure elements consistent with the conserved fold of the #lipocalin family. 📄 doi.org/10.1007/s12104… 👤 EVBC member: @MeilerLab #EVBCpublications
Excited to announce that #ViBioM2024 will be live streamed! Free access for all non-industry professionals. Registration deadline: 24 May 2024 Don't miss out on this exclusive opportunity to join us virtually. #Livestream evbc.uni-jena.de/events/vibiom2…
#ArtificialNeuralNetworks to predict protein post-translational modifications implemented in the computational protein modeling suite #Rosetta. 👤 EVBC member: @MeilerLab 📄 doi.org/10.1371/journa… #EVBCpublications #PTMs #ProteinDesign
Recent advancements in structure-based de novo #DrugDesign, exploring various #computational algorithms, emphasizing efforts to enhance synthetic accessibility and validate proposed frameworks through benchmarking strategies. 👤 EVBC member: @MeilerLab 📄 doi.org/10.1021/acs.jc…
Next-RSV-SEQ: experimental and computational pipeline designed for robust, cost-effective whole genome #sequencing of respiratory syncytial virus (#RSV) from clinical samples. 👤 EVBC member: S. Calvignac-Spencer #EVBCpublications doi.org/10.1128/jcm.01…
EVBC Newsletter 82 / April 2024 includes selected publications and tools from EVBC members, information about #ViBioM2024, our SI #VirusBioinformatics in @VirusesMDPI, upcoming events with approaching deadlines: evbc.uni-jena.de/wp-content/upl…
FISHtoFigure: a software tool for the analysis of mRNA expression at single-cell level. 👤 EVBC member: @CVRHutchinson doi.org/10.1038/s41598… #EVBCpublications #singlecell
Drug-repurposing library screen found #lonafarnib, originally for hepatitis delta virus, effectively inhibiting #RSV by targeting its fusion protein, showing promise in vitro and in mouse models. 👤EVBC member: Chris Lauber doi.org/10.1038/s41467… #DrugDiscovery #Antiviral
#Bacteriophage #therapy shows promise as an adjunct #treatment for #bronchiectasis, as evidenced by successful case reports and series utilizing personalized phage preparations alongside #antibiotics. 👤 EVBC member: @EvelienAdri doi.org/10.1097/mcp.00… #PhageTherapy
#DeepSequencing identified unique and shared genetic variations in #ASFV from experimentally infected #pigs, highlighting the importance for understanding ASFV #evolution and its impact on disease severity. 👤EVBC member: Camille Melissa Johnston doi.org/10.3390/pathog…
Impact of climate change on the expansion of #WestNileVirus in #Europe: significant increase in the area conducive to virus circulation highlighting #climatechange as a critical factor alongside human population changes. 👤EVBC member: @sdellicour doi.org/10.1038/s41467…
In #immunocompromised hosts, Human cytomegalovirus (#HCMV) infiltrates monocyte-derived dendritic cells, triggering a cascade of interactions ultimately dictating the permissiveness of these cells to the virus. 👥EVBC members: @DolkenL @erhard_lab doi.org/10.1038/s41467…
Analysis of metagenomes unveils diverse viral auxiliary metabolic genes (#AMGs) linked to methane metabolism indicating a nuanced relationship between viruses and methane cycling influenced by ecological factors. EVBC member: @Lab_Sullivan doi.org/10.1038/s41467… #metagenomics
Fecal immunochemical test samples from colorectal cancer screening study revealed over 18,000 DNA viruses, with associations found between lifestyle factors and viral diversity. EVBC member: Paula Istvan doi.org/10.1038/s41467… #gutvirome #cancerscreening
Fecal immunochemical test samples from colorectal cancer screening study revealed over 18,000 DNA viruses, with associations found between lifestyle factors and viral diversity. EVBC member: Paula Istvan doi.org/10.1038/s41467… #gutvirome #cancerscreening
PRFect: #machinelearning tool that accurately predicts programmed #ribosomalframeshifts in coding genes, aiding researchers in understanding this complex phenomenon with high accuracy and user-friendly functionality. EVBC members: @linsalrob @AncaGene doi.org/10.1186/s12859…
PoxiPred, an #AI tool, predicts #antigens and T-cell #epitopes for various #poxviruses from a single #proteome file, identifying thousands of potential targets, primarily reactive to CD8+ T-cells. [co-authored by EVBC member A. Kumar] doi.org/10.3390/biolog…
#Machinelearning based on genome-wide mutation data effectively predicts the host origin of Group B Streptococcus, providing insights into host-specific adaptations & aiding in outbreak identification and containment efforts. [EVBC member: @Heiderlab] doi.org/10.1016/j.comp…
Only three more days until #ViBioM2024 submission closes.
Only three more days until #ViBioM2024 submission closes.
VignuzziLab @VignuzziLab
16K Followers 9K Following viruses-evolution-Singapore-fitness! @idlabs_astar. #PrideInSTEM 🏳️🌈 #DiversityInSTEM 🇸🇬🇮🇹🇨🇦🇫🇷🇺🇸🇸🇦🇬🇧🇭🇺🇲🇾Tulio de Oliveira @Tuliodna
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1 Followers 21 Followingsandra arenhart @sandraarenhart
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399 Followers 558 Following God's Battle Axe|| Student, OAU, ILE-IFE|| Animal Scientist In Training || Works at Lordleads Publishers ||Gospel Music Lover || Dunsin Oyekan's Fan.Dr. ABDUL GHAFAR @drabdulghaffar
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40 Followers 225 FollowingJacqueline Shaia, MS @JacquelineShaia
1K Followers 3K Following Anatomist; Clinical & Translational PhD student @ CWRU Passion: IIH & vision research 🧠; blogger (she, her) (opinions are my own) follow IG @ jacquelens_phdJ Θ J Θ @Joist_jo
58 Followers 250 Following #npub1jtrw0rzhjgymfps70mjvnywf9ed3jdzl8zry627sjrv7l7rjfrusrkqjja #BitcoinVignuzziLab @VignuzziLab
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76K Followers 2K Following Microbiology Society: A world in which the science of #microbiology provides maximum benefit to societyMartha Clokie @MarthaClokie
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356 Followers 858 Following PhD, virologist working @IEO_MalagaBartłomiej Grygorcew.. @b_grygorcewicz
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15K Followers 606 Following Associate Professor @YaleEMD / @YaleSPH. Studies 🦟🦠 transmission, evolution, and emergence. PI of @covidCT 🧬. Will sequence for 🍺.ITNSmartAge @ITNSmartAge
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4K Followers 741 Following Pathogen Genomics, Genomic Epidemiology, Data Visualisation, Phylodynamics Head of Data Science, CERI, SU 👩🏾💻🦠🧬📈 @yale 2016. @imperialcollege 2018.Rafal Mostowy @RafalMostowy
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3 Followers 13 FollowingMPI-GEA Jena @MPI_GEA
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3 Followers 25 FollowingRavendra P. Chauhan, .. @DrChauhanRPS
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115 Followers 316 Following Human, Citizen, & Husband. Ph.D. in #ZoonoticViruses, working on #RNA of #Astroviruses at @wustl. Member of @EVirusBioinfC & #EuSVPhages for Life 2023 .. @phagesymp2023
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1K Followers 312 FollowingMasayuki HORIE 堀江.. @Masayuki_Horie
538 Followers 314 Following 獣医ウイルス学研究者。 大阪公立大学獣医微生物学。 Virologist. Laboratory of veterinary microbiology, Osaka Metropolitan University. SC Freiburgを応援しています。Franziska Hufsky @drhulovesbikes
107 Followers 176 Following Scientific Coordinator @EVirusBioinfC Science Communicator @Bright_Giant Loving #science, #bioinformatics, #viruses, #massspec, #metabolomics, and #mountainsVom2023 @vom2023
624 Followers 456 Following The series of biannual conferences on Viruses of Microbes, which will be held in Tbilisi Georgia on July 3-7, 2023. #vom2023 #VirusesOfMicrobes #MicrobiologyNikita Zrelovs @NZrelovs
227 Followers 356 Following Dr. biol. 🧬 Phage enthusiast 👨🔬 Researcher at the Latvian Biomedical Research and Study Centre (@BMC_LV) 🦠🧫Matt Arnold 🔬 @Matt_Arnold_Bio
353 Followers 566 Following viral zoonosis - host shifts PhD Researcher - Wellcome Trust funded - Uni of Glasgow School of Biodiversity, One Health and Veterinary Medicine he/himKieran Lamb @Kieran12Lamb
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142 Followers 127 Following MPI Bremen @MarineMicrobio Microbiology Bioinformatics PhD stuff :-) he/hisMarcin Lubocki @LubockiMarcin
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660 Followers 540 Following Interested in virus evolution | Influenza | Antigenic variation | Phylodynamics | One Health | SARS-CoV-2IATA CSIC @iata_csic
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52 Followers 98 Following Postdoc @ Virginia Tech in Aylward lab studying viral genomicsShoichi Sakaguchi @sho1sakaguchi
151 Followers 291 Following Virology / RdRps / Cats / Veterinary medicineJonathan Eisen @phylogenomics
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936 Followers 276 Following Our group consists of a Theoretical Biology group (headed by Rob de Boer) and a Bioinformatics group (headed by Berend Snel) @UniUtrecht@NIDO2023 @nidovirus2023
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407 Followers 145 Following MRC Investigator at MRC-University of Glasgow Centre for Virus Research. Views expressed my own.Johannes Köster @johanneskoester
3K Followers 94 Following Algorithms for reproducible bioinformatics, Institute of Human Genetics, University of Duisburg-EssenDavid Laehnemann @DLaehnemann
196 Followers 259 Following Tweetdeck behind a paywall, erratic platform owner with no regard for civilized discourse... So long, and thanks for all the fish: @[email protected]The KFERQminer Projec.. @kferqminer
42 Followers 43 Following The KFERQminer Project is a dedicated space for researchers passionate about KFERQ motifs. Please share with us your thoughts as we share the BETA version.gcb2024 @gcb2024
325 Followers 495 Following German Conference on Bioinformatics is an annual international conference devoted to all areas of #bioinformatics | 30 Sep - 2 Oct 2024 | Uni Bielefeld #gcb2024It is so inspiring to be in a virology conference in South Africa. It is amazing how high-level is the science here! Fantastic rotavirus research by Prof Michele Groome, @WitsUniversity #VirologyAfrica2024
Looking forward to speak about your latest results at #ViBioM2024
As #ViBioM2024 approaches, we are excited to provide you with the final list of keynote speakers! Register now: evbc.uni-jena.de/events/vibiom2…
Don’t forget to join #ViBioM2024 in Leuven!
As #ViBioM2024 approaches, we are excited to provide you with the final list of keynote speakers! Register now: evbc.uni-jena.de/events/vibiom2…
Thanks for the Dune inspired fan art @ivanliachko I especially like my pet DNA dragon who has matching hair 💁♀️🐉
It was great to be back at the University of Jena and join the bioinformatics community at the 5th "Middle-earth" meeting. Talks on microbiome, gene regulation, systems microbiology, sequencing, viruses - and seeing so many friends and colleagues! See y next year!
#ViBioM2024 approaching fast! If you’re interested in #viruses and #Bioinformatics, Leuven will be the place to be this May! Looking forward welcoming you all at the #RegaInstitute!
As #ViBioM2024 approaches, we are excited to provide you with the final list of keynote speakers! Register now: evbc.uni-jena.de/events/vibiom2…
Looking forward to present at #ViBioM2024!
As #ViBioM2024 approaches, we are excited to provide you with the final list of keynote speakers! Register now: evbc.uni-jena.de/events/vibiom2…
As I settle into my new role as Deputy Director of the Genomics Surveillance Unit at the Wellcome Sanger Institute, I highlight in this blog, how the SA and U.K. strategic partnership can help to advance genomics at a global scale - sangerinstitute.blog/2024/02/27/mee… @sangerinstitute
I have a feeling SARS-CoV-2 is a bit over presented...(: @evogytis pulled together too good of a paper (:
This shiny app that gives you a word cloud based on your Google Scholar profile is pretty slick... shiny.rcg.sfu.ca/u/rdmorin/scho… #rstats #genomics #bioinformatics #Salmonella
🧬Faculty Job Post (Assist. Prof. TT)🧬 Join us in Molecular Genetics @UofT. The search is thematically broad and looking for innovation for the future of #genetics. 🦠Please RT / Pass along the info🍄 #Genomics #PostDoc @DonnellyCentre @MoGen_Grad jobs.utoronto.ca/job/Toronto-As…
The international Bioinformatics Workshop on Virus Evolution and Molecular Epidemiology (now on 28th edition in 2024 in Brasilia) has a focused module on Next Generation Sequencing (NGS) with Faculty from top genomics facilities in the world @broadinstitute @sangerinstitute…
Sending your paper for publication
Congrats all and big thanks to the team! 🥳👏 @NatureRevMicro
SARS-CoV-2 biology and host interactions @NatureRevMicro An updated summary of the SARS-CoV-2 life cycle, gene function and virus–host interactions, including recent landmark findings on coronavirus biology trebuchet.public.springernature.app/get_content/d4…
Ich stelle mir einen Grossprotest von Familien, Eltern, Kindern vor, für bessere Betreuungsqualität, bessere Schulausstattung, gegen Kinderarmut…der soviel Aufmerksamkeit bekommt wie die Bauern gerade.
🥳 Shout-out to @BellerLeen and @RaesLab: Our paper on Successional Stages in Infant Gut Microbiota Maturation, was highlighted as an @ASMicrobiology Top Cited paper in 2023. 🥳 journals.asm.org/doi/10.1128/mb…
🎄"May your days be merry and bright"🎄
So exiting to see
What better way to end the year than announcing the exciting first part of the keynote speaker line-up for #ViBioM2024? #keynotespeakers #virusbioinformatics @NathanGrubaugh, @mkrupovic, @houzhou, L. van der Hoek, @noort_zuit