NIDA Center in Omics Systems Genetics & Addictome @OPARProject
Our goal is to empower researchers to analyze the interwoven roles of genetic, epigenetic & environmental variation on drug abuse risk, relapse, and treatment. opar.io Joined January 2018-
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Hao Chen’s @haomself great presentation on the latest version of the rat genome presented here: Improved Rat Reference Genome and Updates on Rat Genomic Resources (Sept 2022) utk.hosted.panopto.com/Panopto/Pages/… @NIDAnews @Ilovepigenetics
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Laura Saba gave a great talk today at #GBB2022 @IBANGStweets on mRNA isoform diversity in brain and liver and how to use the new rat genome assembly (7.2). Ahh, if one we could go deeper into isoforms $$$$$ @LauraSaba1 @AbePalmer @haomself
Hilarious!
Why not! Stick with it.
If you needed a motivation plus a primer on using GeneNetwork, this is the paper for you: Genes | Free Full-Text | New Insights on Gene by Environmental Effects of Drugs of Abuse in Animal Models Using GeneNetwork | HTML @AlishaChunduri @DavidAshbrook mdpi.com/2073-4425/13/4…
Bravo Jeremy. @OPARProject
Or there is that ultralong cold water soak routine. No hammer needed.
Big argh. Condelences. This is worth a letter to CSR.
Big argh. Condelences. This is worth a letter to CSR.
New OPAR.io design courtesy of lots of people but special thanks to Arthur Centeno, Laura Saba, Saunak Sen, and Hao Chen. @GeneNetwork2 @robwilliamsiii
Three great new webinars at opar.io/training/osga-… Webinar18 – Introduction to the Methylome: Technologies and Analysis Webinar #19 – A Rube Goldbergian Approach to Scheduling Rodent Behavior Experiments and Data Collection Webinar #20 – Organizing data in spreadsheets
Thanks Katherine. Reprint request to @robwilliamsiii
Thanks Katherine. Reprint request to @robwilliamsiii
Guix: A most advanced operating system | Hacker News @GeneNetwork2 We make heavy use if Guix in Genenetwork 2 snd GN3 (our API version of GN). Talk to @pjotrprins . He also contributes to Guix, especially for HPC environments. news.ycombinator.com/item?id=282394…
A Straightforward Way To Extend CSV With Metadata · GitHub @GeneNetwork2 gist.github.com/seece/97d02d65…
Beautiful. Check out William Calvin’s essay The Throwing Madonna. Finally some harder evidence. @glennister_ad @KordingLab The question we should be asking much more: How does the brain create parasynchrony?
Mary Catherine Bateson: Systems Thinker | Edge.org @GeneNetwork2 @pjotrprins @EricTopol What a great overview of her contributions edge.org/conversation/m…
Logan: Be more than happy to place your data in @GeneNetwork2 ad a FAIR+ resource. We have WGCNA kinda-sorta built-in. @haomself @Ilovepigenetics @LauraRoseFenlon @AbePalmer @brainaddiction How many more samples or regions? email me: [email protected]
Logan: Be more than happy to place your data in @GeneNetwork2 ad a FAIR+ resource. We have WGCNA kinda-sorta built-in. @haomself @Ilovepigenetics @LauraRoseFenlon @AbePalmer @brainaddiction How many more samples or regions? email me: [email protected]
Learn R through examples A good resource and a good starting point gexijin.github.io/learnR/index.h…
JUNE 11: Expect a great 90-min talk/workshop and Q&A by ace statistical geneticist, Karl Broman,on data quality control and handling omic (RNA-seq) sample mix-ups. Register soon at: bit.ly/osga_2021-06-11 @haomself @Ilovepigenetics @robwilliamsiii @DavidAshbrook @LauraSaba1
Google AI Blog: A Browsable Petascale Reconstruction of the Human Cortex: 1 mm^3 serial electron microscopy of 5000 sections. Would be cool to do this 400 times with 100 fully sequenced BXD strains ;-) @DavidAshbrook ai.googleblog.com/2021/06/a-brow…
My guess: George K?, ?, Jim G? about 2006
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JB Johnston Club 🧠... @JBJohnstonClub
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