Anand Mayakonda 🕉️ @anand_mt
Bioinformatics, genetics, and cancer genomics @dkfz. I also tweet #Rstats #dataviz @baseRgraphics Heidelberg Joined April 2009-
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Anand Mayakonda 🕉️ retweeted
Introducing grabstract: Transform complex scientific texts into clear, visual insights Just paste your abstract to create: 📊 Graphical abstracts 🖼️ Scientific posters 🌐 Mermaid diagrams 📈 Infographics Try it for free: grabstract.io #AcademicTwitter #SciComm
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Anand Mayakonda 🕉️ retweeted
Introducing figeno, my visualization software for (epi)genomics🧬🎨. Supports many data types (bigwig, HiC, @nanopore data with base modifications, WGS...) and is easy to use with a GUI. Can visualize multiple regions (e.g. for breakpoints). github.com/CompEpigen/fig…
Anand Mayakonda 🕉️ retweeted
Big thanks to all the Reviewers and NIDCR! We are looking for passionate researchers to work with us on HNSCC!
Trackplot: a fast and minimal dependency R script for epigenomic enrichment plots academic.oup.com/bioinformatics… github.com/PoisonAlien/tr…
squaRify - A minimal, zero dependency package for drawing treemaps in R. Inspired by @laserson's squarify python implementation github.com/PoisonAlien/sq… #treemaps #rstats
Anand Mayakonda 🕉️ retweeted
🚀 ONLINE @NatureGenet 📰 Neuroblastoma arises in early fetal development and its evolutionary duration predicts outcome 🧑🏽🤝🧑🏻 Verena Körber, Frank Westermann, Thomas Höfer, and team ⬇️ go.nature.com/3TR7aqW #neuroblastoma @NatResCancer
Anand Mayakonda 🕉️ retweeted
I've been meaning to advertise echtvar a bit more. Indeed it's oddly fast and pretty flexible for annotating with large databases. In the paper, we even encoded gene, transcript, impact for all possible SNPs (3 per position) and the archive is still small.
I've been meaning to advertise echtvar a bit more. Indeed it's oddly fast and pretty flexible for annotating with large databases. In the paper, we even encoded gene, transcript, impact for all possible SNPs (3 per position) and the archive is still small.
It’s unbelievable how fast #echtvar by @brent_p is. Annotating a whole genome vcf (5m vars) with gnomad and internal allele frequencies takes < 5mins. 🙌 github.com/brentp/echtvar
Anand Mayakonda 🕉️ retweeted
We are seeking computational postdocs for single-cell genomics in cancer @DKFZ and @KiTZ_HD Please help RT Thank you nature.com/naturecareers/…
Anand Mayakonda 🕉️ retweeted
Very excited to share our DNA methylome studies in esophageal cancer, a +5-year long journey with the amazing @benbfly and @yueyuan40704346, started @CSCancerCare and polished @CCMB_USC @uscnorris biorxiv.org/content/10.110…
All these years and I didn’t know that this existed! #samtools
Anand Mayakonda 🕉️ retweeted
Join us this Friday (3-6PM, July 29th): 2022 USC Head and Neck Cancer Symposium. This event features leading figures in the field sharing new insights on both translational and basic research on head and neck cancer! We have both in-person and online options!
Anand Mayakonda 🕉️ retweeted
📊Rを使った美しい作図を紹介するプロジェクト。ggplot2やlatticeを使わずに標準の作図機能でやるのがすごい。 ggplot2とは違った綺麗さがあるなと感じます。自分もこのくらいできるようになりたいな〜
📊Rを使った美しい作図を紹介するプロジェクト。ggplot2やlatticeを使わずに標準の作図機能でやるのがすごい。 ggplot2とは違った綺麗さがあるなと感じます。自分もこのくらいできるようになりたいな〜
Do you like #Rstats and #Datavisualization? Follow @baseRgraphics where I tweet pretty plots (with code and data) generated using pure base graphics with no dependencies. This is for those who like to learn and customize base R plotting functions. #BaseisBeautiful :)
Anand Mayakonda 🕉️ retweeted
Amazing opportunity for an early-career researcher to become a computational group leader in the Division of Cancer Epigenomics at the German Cancer Research Center in Heidelberg. 👇
Somewhere near Kukke and Shiribagilu. Western ghats are truly mesmerizing.
Person maintaining this account is having fun with the alt text 😄
Person maintaining this account is having fun with the alt text 😄
Oh wow! Just saw that our @genomeresearch article for the #maftools @Bioconductor package crossed over 1000 citations. Thanks to all the contributors and users for citing :) Just in time for Bioconductor 3.15 release, with support for CNV, and cancer hotspot report. @dechen_lin
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