Gary Thompson @continuousspin
Bio NMR Spectroscopist & Facility Manager at the University of Kent. Software developer with CCPN (Collaborative Computing Project for NMR). Joined December 2010-
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Updates to NEF-Pipelines 0.1.60 Bug fixes, better support for MARS, improved support for generating synthetic peak lists including 13C detect spectra for IDPs
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NEF-Pipelines version 0.1.53 ***BMRB and NMR-STAR support [sequences, shifts and direct downloads from the BMRB]**** Plus lots of new features in NEF-Pipeline since 0.1.41 XEASY & FLYA support, DNS/RNA support for fasta, TALOS import & export and more
NEF-Pipelines 0.1.41 released with support for import of xeasy [flya dialect] sequence, shifts and peaks
NEF-Pipelines 0.1.37 released with improved parsing of sparky peak assignments
NEF-Pipelines 0.1.36 with: * support for sparky (import peaks and sequences) * RNA and DNA support in sparky as well - now why would that be!
nef pipelines releases version 0.1.34 [changes from 0.1.30 onwards] * add rpf shift list exporter * add sparky peak list importer [alpha no tests] * add ability to rename nef frames * add about verbose option * add shifts make peaks
NEF-Pipelines 0.1.30 released with support for exporting sparky peaks and assignments
nef pipelines 0.1.24 released with support for rdcs from csv files and output to pales and xplor
Fastest start to finish on adding a tool to nef pipelines: 1 hour for the basics of adding a sparky shift reader. Look for it in the distribution soon!
nef pipelines v0.1.23 published highlights support reading xplor dihedral & distance restraints [but only single atom selections for distances] read sequences from xplor psf files run tests from the command line [nef test] improvemenets to help text and error messages
Nef-piplines v0.1.22 released main change the test command now works
Gary Thompson retweeted
Simulations with #NMR, SAXS & FRET reveal shift from functional to disease forms in local and global structure of disordered protein tau @LisaPietrek @l_stelzl B Schuler @mz_science @HummerLab @MPIbp #Alzheimer Read it for free here #OpenAccess go.acs.org/Rj
Gary Thompson retweeted
If you are a Ukrainian scientist, there are several labs at Institut Pasteur that can host you. More info 👇 research.pasteur.fr/en/the-list-of…
Gary Thompson retweeted
Find out about and register for our online CcpNmr Analysis V3 workshops on Structure (9 March), Screening (22 March) and Macro Writing (6 April), all 13:00-16:00 UK time: ccpn.ac.uk/outreach/works…
Gary Thompson retweeted
50 Shades of Brown: An Index Of Chemical Misery
Gary Thompson retweeted
This scene from a horror film 😱 is brought to you by careful control over surface wettability Read the article: ow.ly/TMJS50GmIdG
Just added a blog entry on using binder to display ipython / jupyter notebooks as an interactive learning tool without having lots of visible python code cluttering up the page canyouanalysethis.blogspot.com/2021/09/hiding…
Gary Thompson retweeted
Now, it’s easy for me to decide which mask I’ll be wearing, even if they’re not mandatory. This virus is not a joke for young people and those eligible must get vaccinated. Rest assured, I’m on the long road to recovery!🤞🦠 Scroll for more information.
A nice summary from a friend on the difference between predictions and the ensuing reality blogs.kent.ac.uk/wass-michaelis…
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