DeepMI Lab @deepmilab

AI Methods for Medical Image Analysis - PI Martin Reuter DZNE Bonn Germany & HMS Boston Joined February 2020

Tweets

58
Followers

468
Following

3
Likes

3

DeepMI Lab @deepmilab

2 months ago

Dear neuroimaging community: We would like to announce this year's #FastSurfer course in Bonn, Germany, from Sep. 17 - 19. Registration is now open deep-mi.org/events/worksho… Looking forward to seeing you there ...

0 0 2 69 0

DeepMI Lab @deepmilab

7 months ago

We just released #FastSurfer Version 2.4.1 with some hot fixes: --allow_root working, T2 can be passed again (for hypothalamus) and long stream with different image geometries. github.com/Deep-MI/FastSu…

0 3 16 1K 4

DeepMI Lab @deepmilab

7 months ago

Happy to announce a new FastSurfer release v2.4 with an awesome longitudinal pipeline and more ways to manually edit (among other things) deep-mi.org/FastSurfer github.com/Deep-MI/FastSu… #FastSurfer

0 0 5 147 2

DeepMI Lab @deepmilab

a year ago

Check out our newly released #FastSurfer v2.3 now with hypothalamus sub-segmentation ( #HypVINN ), now running also on Mac and H100 GPUs. Release notes: github.com/Deep-MI/FastSu… , Dockerhub: hub.docker.com/r/deepmi/fasts… , Documentation: deep-mi.org/FastSurfer

0 1 8 224 1

DeepMI Lab @deepmilab

a year ago

Happy to announce the 2024 #DeepMI #FastSurfer / #FreeSurfer course: join us Sept 26-27 in Bonn, Germany, for two exciting days on state-of-the-art methods in human structural neuroimaging. More info: deep-mi.org/fastsurfer-cou…

0 12 23 2K 11

Download Image

DeepMI Lab @deepmilab

2 years ago

Ho ho ho, after weeks of validating: the Xmas release of #FastSurfer is out: Version 2.2. was released today! It fixes an issue with the eTIV among other improvements. Try it out and let us know what you think. github.com/Deep-MI/FastSu… hub.docker.com/repository/doc…

2 6 33 4K 11

DeepMI Lab @deepmilab

2 years ago

Interested in sub-segmenting the hypothalamus region? Take a look at our new paper in @ImagingNeurosci which will become a module in #FastSurfer next year. @DZNE_en @MGHMartinos doi.org/10.1162/imag_a…

0 6 24 3K 2

DeepMI Lab @deepmilab

2 years ago

How can we measure head motion during MRI acquisition? Come see us at #OHBM2023 Sun 12:15-14:15 and Mon 13:00-15:00 @ClemensPollak will stand by our poster (#746) on Quantifying Head Motion in large Population Cohorts. Also see sciencedirect.com/science/articl… @DZNE_en @MGHMartinos

0 0 4 445 1

Download Image

DeepMI Lab @deepmilab

2 years ago

Happy to announce our newest #FastSurfer release now including #CerebNet for the sub-segmentation of the cerebellum. Enjoy github.com/Deep-MI/FastSu…

0 6 22 2K 3

DeepMI Lab @deepmilab

2 years ago

If you want to learn about head motion in MRI, check out our new paper: doi.org/10.1016/j.neur… where we present a robust registration for tracking and show associations of motion with age, BMI and session duration in the #RhinelandStudy . #MartinosPubs @DZNE_en @MGHMartinos

0 2 6 571 0

Imaging Neuroscience @ImagingNeurosci

2 years ago

All NeuroImage and NeuroImage:Reports editors have resigned over the high publication fee, and are starting a new non-profit journal imaging-neuroscience.org This comes with great regret, and a huge amount of thought and discussion- please read announcement to get more details.

157 2K 4K 2.3M 236

Download Image

DeepMI Lab @deepmilab

3 years ago

Very happy to finally release #FastSurfer 2.0 after thorough testing, now with native sub-mm support! Take it for a spin and let us know what you think. github.com/Deep-MI/FastSu…

2 14 87 14K 16

DeepMI Lab @deepmilab

3 years ago

We are proud to announce that our #FastSurfer fastsurfer.net neuro MRI methods are now funded for open-source development via the @ChanZuckerberg Initiative chanzuckerberg.com/eoss/proposals… @DZNE_en @DZNE_de @MGHMartinos

0 4 13 0 0

DeepMI Lab @deepmilab

3 years ago

Congrats to Leonie and @kueglerd for their accepted @MICCAI_Society paper this year. We analyze show training your segmentation model with data at multiple imaging resolutions may bias segmentations and propose a solution to reduce this bias effect. arxiv.org/abs/2206.14919

1 2 3 0 0

DeepMI Lab @deepmilab

3 years ago

Today we released #FastSurfer v1.1, basing the surface processing on FreeSurfer 7.2. It's even faster now! Stay tuned for our next major release to feature high-res processing with FastSurferVINN github.com/Deep-MI/FastSu…

0 4 16 0 0

DeepMI Lab @deepmilab

3 years ago

Congrats to @Saikat_Roy_ and @kueglerd for our accepted @midl_conference paper openreview.net/forum?id=Ob62J… contrasting 2.5D and 3D CNN for (brain) segmentation!

0 3 4 0 0

DeepMI Lab @deepmilab

3 years ago

Very excited to see our research featured @helmholtz_ai . Thanks for the funding, without it this would not be possible.

Helmholtz AI @helmholtz_ai

3 years ago

Very excited to see our research featured @helmholtz_ai . Thanks for the funding, without it this would not be possible.

0 8 22 0 1

Download Image

0 0 5 0 0

Helmholtz AI @helmholtz_ai

3 years ago

Today's #HelmholtzAIproject #showcase is developing #AI methods for early detection of neurodegenerative diseases like Alzheimer's using #MRI data.🧠🧑‍💻 Read more here:👉bit.ly/DeGen_project DeGen is a collaborative project of researchers from @fz_juelich and @DZNE_en.