Kateryna Maksymenko @k_maksymenko
Tübingen, Germany Joined May 2020-
Tweets26
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The HECTOR method is now out, where starting from maximal steric complementarity could achieve high-affinity binders, with experimental validation against VEGF and IL-7Ra as targets. paper: doi.org/10.1002/advs.2… code: doi.org/10.24433/CO.92…
1/4 🚀 Announcing the 2025 Protein Engineering Tournament. This year’s challenge: design PETase enzymes, which degrade the type of plastic in bottles. Can AI-guided protein design help solve the climate crisis? Let’s find out! ⬇️ #AIforBiology #ClimateTech #ProteinEngineering…
We have an available PhD project in our group as part of this round of the IMPRS: phd.tuebingen.mpg.de/14722/phdproje…
📢The future Pereira lab is hiring! We will start at @_VIB_AI in February 2025 and are looking for a postdoc to join and kick-start our team 🤓 If you want to leverage AI and large networks to explore and understand the protein universe 🌌, check below! jobs.vib.be/j/93314/postdo…
🚨 JOB ALERT! Interested in protein design for advanced therapies? @EckhardLab and I are seeking a researcher to join our academic-industry project for the next three years. Please look over all the details here and apply soon!: aiproteindesign.com/jointhelab.
We have up to three HiWi (1 year contract) and/or Master's thesis projects in Tuebingen on topics of: i) deimmunization of synthetic cytokines, ii) Optimization of metal-binding proteins, or iii) Characterization of cell-penetrating peptides. Please, get in touch if interested.
We just released the "protein design toolkit", integrating tools from Damietta, ProteinMPNN and OpenMM. An interactive tutorial is available at the server damietta.de. Recommended usage is described in the paper: doi.org/10.1093/nar/gk… and feedback is most welcome!
Our preprint on tuning of G-CSFR signalling. Many thanks to @PiehlerLab for the great collaboration! biorxiv.org/content/10.110…
Happy to share our new protein design software (bio.mpg.de/damietta) just published in @CellRepMethods !
Happy to share our new protein design software (bio.mpg.de/damietta) just published in @CellRepMethods ! https://t.co/kZTkN3dZto
Please retweet!📢📢 We are looking to appoint a BBSRC-funded post-doctoral research associate to work in the area of de novo enzyme design with alpha-helical barrels using computational design, protein biochemistry, and directed evolution. More details below
I’m looking for a postdoc who would like to work primarily in the wet lab while also learning a bit of computational protein design. Lots of exciting projects! Please reach out if interested!
Job advertisement Group Torsten Schwede PhD position in structural biology of viral proteins biozentrum.unibas.ch/open-positions… @biozentrum @UniBasel_en #Biozentrum #Basel #research #science #joboffer #phd
Save the date! The rescheduled Keystone Symposium on "Computational Design and Modeling of Biomolecules" will take place in Banff 🇨🇦 on March 14-17, 2023. #proteindesign tks.keystonesymposia.org/index.cfm?e=We…
APFED-22 is over. 🥺 Thanks to all of you for sharing your research and enthusiasm, you made this conference possible! See you (hopefully) at APFED-23! Tschüssi!!! 🌟😻😃🎉
Here's a quick rundown on recent examples and challenges of protein drug design, along with some perspectives on achieving faster design pipelines. authors.elsevier.com/a/1egW6_ggBEtz…
1/ 🇺🇦 As you have all seen the horrific news coming from #Ukraine over the last 2 days, many of you asked what you can do to help. This thread is a quick guide on actionable steps that every indifferent person can take now. Please share🧵
An exciting day for structural biology! AlphaFold And RosaTTAFold released. nature.com/articles/s4158… science.sciencemag.org/content/early/…
Happy to share my @FameLab presentation among other great talks for the @FameLab_germany Karlsruhe regional heat. You can also vote for your favourite talk below:😉 karlsruhe.de/b2/wissenschaf…

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5 Followers 208 Following Egyptian | Master student of Computational Peptide Design | Shanghai Institute of Materia Medica | Chinese Academy of Sciences @UCAS1978
BlackboxStocks🇺�... @Jueakbee543297
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Vidhi✨🧠🌱🦠�... @vidseh
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LoogerLab @LoogerL
5K Followers 5K Following NOT CHECKING THIS CESSPOOL OF HATE. EMAIL ME. ENEMY WITHIN @UCSD
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Dr. Alnemari Mohammed @Alarabia89
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Jaruwatana (Sodai) Lo... @SodaiL
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Stanisław Dunin-Hork... @SDuninHorkawicz
760 Followers 1K Following Max Planck Institute for Biology in Tübingen and the University of Warsaw. Application of computational tools to study protein evolution. @staszekdh.bsky.social
Müller Lab @Devbiokonstanz
310 Followers 152 Following We combine genetic, biophysical and theoretical approaches to understand self-organizing processes during development.
Alexander Imani Cowen... @ImanisMind
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Cecilia Fruet @CeciliaFruet
42 Followers 134 Following PhD student in Physics at EPFL 🧫 Bacterial evolution, antibiotic resistance, stochastic models. 🦠 Bacterial protein and membrane dynamics, MD simulations. 💻
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2 Followers 20 Following
Shu Yao Leong @jlsyao_scicom
155 Followers 311 Following 🇲🇾🇯🇵🇩🇪 PhD candidate at Uni Tübingen. Thoughts are my own.
Kaiyu Qiu 邱锴宇 @21qiu
255 Followers 641 Following Graduate student at Max Planck Institute working on protein evolution
Duarte ICS @DuarteIcs
192 Followers 2K Following Microbiology professor at @ufscaroficial. These are personal views.
Saacnicteh Toledo-Pat... @SaacNicteh
648 Followers 1K Following Principal Investigator | Buribushi Fellow @OISTedu working on Molecular Bioengineering & Evolution, @MaxPlanckAlumni, 🇲🇽🇩🇪🇯🇵🏳️🌈 🏳️
Christopher W. Wood @ChrisWellsWood
885 Followers 687 Following Senior Lecturer in Biotechnology, University of Edinburgh. We develop methods and tools to make protein design and engineering more reliable and accessible.
Klara Hlouchova lab @KlaraH_lab
491 Followers 401 Following sequence space deep diving 🐟 synthetic & evolutionary biology lab @CharlesUniPRG and @BIOCEV_science 🇨🇿🇲🇽🇷🇺🇮🇹🇸🇰🇺🇦
Franziska Sendker @SendkerFL
519 Followers 238 Following Postdoc - designing proteins at Dana-Farber/Harvard Medical School | @EMBOFellows | formerly, evolutionary biochemistry at Max PIanck Marburg
Margaux Aubel @AubelMargaux
114 Followers 164 Following Postdoc in Münster, Molecular Evolution and Bioinformatics
Simon Duerr @simonduerr
3K Followers 2K Following Assistant Professor UAS at HES-SO Valais-Wallis 🇨🇭 🤗 HF Fellow. Working on AI, Protein Design and Open Science. Creator of https://t.co/Y9GsDuZ0L1
Vikram Alva @Vikram_Alva
560 Followers 747 Following Protein evolution // MPI Bioinformatics Toolkit @mpitoolkit // prokaryotic cell-surface proteins @MPI_Bio
Machine learning for ... @ml4proteins
8K Followers 124 Following Seminar series on machine learning for protein engineering. Details for seminars and slack are on our website. DM us if you're interested in presenting!
Kevin K. Yang 楊凱�... @KevinKaichuang
21K Followers 6K Following Principal Researcher in BioML @MSFTResearch (@MSRNE). He/him/他. 🇹🇼
Alexandre Bonvin - al... @amjjbonvin
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Frauke Graeter @graeter_mbm
687 Followers 119 Following
Reinier de Vries @_Reinier
76 Followers 356 Following PhD student in Computational Biomolecular Dynamics Group @CompBioPhys @mpi_nat
Vedran Miletić 🇭�... @VedranMiletic
655 Followers 2K Following HPC software dev #MPCDF @maxplanckpress | #GROMACS contributor | #cpp on #ArchLinux and #FreeBSD | @HITStudies alumnus | https://t.co/XVpfcwVOId
David de Sancho @daviddesancho
507 Followers 1K Following protein folder, father of two at @ehu_kimika & @DIPCehu
Vidhi✨🧠🌱🦠�... @vidseh
188 Followers 1K Following PhD student at #Dioscuri Centre in @MCB_UJ and @MPIbp #glycotime 🦋: https://t.co/eOIIdHYGtr
BioExcel CoE @BioExcelCoE
4K Followers 689 Following Centre of Excellence supporting high-performance computing in biomolecular research. Funded by @EuroHPC_JU and member states 🇸🇪 🇳🇱 🇩🇪 🇪🇸 🇫🇮 🇳🇴
Adaptyv Bio @adaptyvbio
2K Followers 1 Following You design proteins - we run the lab. We build an automated lab that enables anyone to become a protein designer.
Linda Chen @lindachen0097
94 Followers 249 Following 👩🏻🔬 (26, she/her) from the land down under 🦘 PhD student in Weir Lab at the Max Planck Institute for Biology 🇩🇪
Damietta Protein Desi... @proteintoolkit
11 Followers 0 Following News and updates of the protein design toolkit; https://t.co/oU4golrlHz
WoolfsonLab @WoolfsonLab
1K Followers 184 Following Protein Design and Synthetic Biology research lab in the School of Chemistry, University of Bristol and the Center for Protein Design, University of Copenhagen.
Olive Laprévote 🌻 @PestoFasta
106 Followers 187 Following PhD student at Höcker Lab, trying hard to design protein walkers! Hitchhiker 👍 Street juggler 🤹 He/she/they
Khmelinskaia Lab @akhmelinlab
447 Followers 147 Following The group of Protein Design 🧬 and Self-Assembly @LMU_Muenchen, Germany
Thomas Schlichthaerle @schlichthaerle
491 Followers 385 Following PostDoc working on Protein Design problems in the Baker Lab, previously working with DNA-PAINT & DNA Nanotechnology
Noelia Ferruz @ferruz_noelia
5K Followers 755 Following Group leader at @CRGenomica. Generative models for protein design 🥼🧪💻. Mountain lover 🏃♀️🚵♀️
Khaled A. Selim @Selim_Khaled_
1K Followers 364 Following J.Professor for Microbiology & Cell Signaling @HHU_de previously @CoE_CMFI Central Metabolism Coordination by #PII & #cdiAMP signaling #Cyanobacteria
Brian Jimenez @br_jimenez
555 Followers 615 Following CTO at @Zymvol I develop #LightDock software & I'm the minion of my 🐈. Former @ALBAsynchrotron @BSC_CNS @UniUtrecht
The Colombo Lab @lab_colombo
2K Followers 2K Following Giorgio Colombo's Computational Chemistry and Biology Lab; Always Room for Improvement; University of Pavia, Italy. @lab-colombo.bsky.social
Cell Reports Methods @CellRepMethods
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Pranam Chatterjee @pranamanam
4K Followers 339 Following Generating biologics to program biology! 💻🧫 Assistant Professor at @Penn | Co-Founder @GametoGen and @UbiquiTxINC | Formerly @MIT '16 '18 '20 and @harvardmed
Gabriel Rocklin @grocklin
3K Followers 595 Following High-throughput protein design and biophysics | Asst Prof, Northwestern Pharmacology @NuFeinbergMed @NUSynBio.
Guto Rhys @guto_rhys
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Stanisław Dunin-Hork... @SDuninHorkawicz
760 Followers 1K Following Max Planck Institute for Biology in Tübingen and the University of Warsaw. Application of computational tools to study protein evolution. @staszekdh.bsky.social
Jens Meiler Lab @MeilerLab
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Müller Lab @Devbiokonstanz
310 Followers 152 Following We combine genetic, biophysical and theoretical approaches to understand self-organizing processes during development.
Alexander Imani Cowen... @ImanisMind
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Cecilia Fruet @CeciliaFruet
42 Followers 134 Following PhD student in Physics at EPFL 🧫 Bacterial evolution, antibiotic resistance, stochastic models. 🦠 Bacterial protein and membrane dynamics, MD simulations. 💻
Дождь @tvrain
2.2M Followers 983 Following Читайте нас на сайте: https://t.co/UqRizzkeIL Поддержите Дождь по ссылке: https://t.co/JeLwIJslft
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134 Followers 921 Following EECS PhD student @oregonstate @MDavidLab studying protein language models for the microbiome and scientific discovery.
Karim Rafie @KDoc2017
668 Followers 1K Following Assistant Professor @rijksuniversiteitgroningen. Structural biologist / Protein biochem / Virologist. #FFF #ScientistsForFuture
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255 Followers 641 Following Graduate student at Max Planck Institute working on protein evolution
Tomoaki Kinjo @tkinjo8
5K Followers 6K Following Postdoc in Kuhlman lab @UNC_BCBP Computational protein design for cancer immunotherapy
Duarte ICS @DuarteIcs
192 Followers 2K Following Microbiology professor at @ufscaroficial. These are personal views.
Saacnicteh Toledo-Pat... @SaacNicteh
648 Followers 1K Following Principal Investigator | Buribushi Fellow @OISTedu working on Molecular Bioengineering & Evolution, @MaxPlanckAlumni, 🇲🇽🇩🇪🇯🇵🏳️🌈 🏳️
Birte Hoecker @BirteHoecker
182 Followers 46 Following
Christopher W. Wood @ChrisWellsWood
885 Followers 687 Following Senior Lecturer in Biotechnology, University of Edinburgh. We develop methods and tools to make protein design and engineering more reliable and accessible.
Klara Hlouchova lab @KlaraH_lab
491 Followers 401 Following sequence space deep diving 🐟 synthetic & evolutionary biology lab @CharlesUniPRG and @BIOCEV_science 🇨🇿🇲🇽🇷🇺🇮🇹🇸🇰🇺🇦
Franziska Sendker @SendkerFL
519 Followers 238 Following Postdoc - designing proteins at Dana-Farber/Harvard Medical School | @EMBOFellows | formerly, evolutionary biochemistry at Max PIanck Marburg
Simon Duerr @simonduerr
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APFED 2022 @apfed2022
205 Followers 0 Following Conference: Advances in Protein Folding, Evolution & Design 2022
Vikram Alva @Vikram_Alva
560 Followers 747 Following Protein evolution // MPI Bioinformatics Toolkit @mpitoolkit // prokaryotic cell-surface proteins @MPI_Bio
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Anupam Gautam @Anupam__Gautam
124 Followers 185 Following Metagenomics ∞ Metabolomics ∞ Algorithms | works in @husondaniel lab at @uni_tue & @MPI_Bio
Jue Wang @jueseph
2K Followers 760 Following Research scientist @googledeepmind. Formerly @UWproteindesign @ginkgo @HMS_SysBio.
Machine learning for ... @ml4proteins
8K Followers 124 Following Seminar series on machine learning for protein engineering. Details for seminars and slack are on our website. DM us if you're interested in presenting!