Katherine Benjamin @kfbenjamin
Applied topology PhD student @OxUniMaths people.maths.ox.ac.uk/benjamin/ Oxford, UK Joined November 2022-
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This was a lot of work! ProCyon is a model that integrates protein sequences, structures, and natural language to predict and generate protein phenotypes Check the paper biorxiv.org/content/10.110… @ImperialMed @KingsCollegeLon @imperial_mrcdtp @KingsIoPPN @imperialcollege
This was a lot of work! ProCyon is a model that integrates protein sequences, structures, and natural language to predict and generate protein phenotypes Check the paper biorxiv.org/content/10.110… @ImperialMed @KingsCollegeLon @imperial_mrcdtp @KingsIoPPN @imperialcollege
When a team at @NDMOxford wanted to know more about cells they were studying as part of research in to kidney disease, they found perfect partners in @OxUniMaths & @mpicbg. Read about @BetterKidneys @haharrington @kfbenjamin & colleagues' collaboration: maths.ox.ac.uk/node/68470
Arguably one of the least utilised but most powerful features of persistent homology (PH) is functoriality. Large swathes of data come pre-divided into distinguished, disjoint subsets (a priori/via clustering). A functorial PH pipeline lets us analyse how these subsets interact!
Wonderful week of rainbows, maths and manuscripts! Chromatic work by Abhinav Natarajan @tomrchaplin @majirouses @adambrownphd Toric fibre products and MLE by Niharika Paul @JaneIvyCoons @tudresden_de @OxUniMaths arxiv.org/abs/2405.19303 arxiv.org/abs/2405.13897
So excited to see this 59 authors collaboration finally out! Kudos to @LucaTubiana for leading and coordinating this years long project @CostEutopia
So excited to see this 59 authors collaboration finally out! Kudos to @LucaTubiana for leading and coordinating this years long project @CostEutopia
Really pleased to finally share my preprint: Diffusion Geometry (1/4) Diffusion geometry defines Riemannian geometry for data and probability spaces! arxiv.org/abs/2405.10858
This is going to be super interesting! Hear about how mathematical topology can shed light on actual mecahnisms going on in our immune cells! Sign up for this free online webinar as part of our @uclchimera programme . Fri 26 April, 10-11am
This is going to be super interesting! Hear about how mathematical topology can shed light on actual mecahnisms going on in our immune cells! Sign up for this free online webinar as part of our @uclchimera programme . Fri 26 April, 10-11am
I had a great time presenting our research on spatial transcriptomics and topological data analysis today! Incredibly honoured to have been chosen as a medallist #STEM4Brit
I had a great time presenting our research on spatial transcriptomics and topological data analysis today! Incredibly honoured to have been chosen as a medallist #STEM4Brit
Amazing to see this paper finally published! @ProfHampshire @imperial_mrcdtp
Amazing to see this paper finally published! @ProfHampshire @imperial_mrcdtp
Thanks @osumray for a very entertaining talk on quiver laplacians and applications 🎶
🌟Applications open - LOGML 2024🌟 👥 Mentor-led projects, expert talks, tutorials, socials, and a networking night 📝 Application form: logml.ai 📅 Apply by 26 Jan 2024 📝 📩 Questions? [email protected] #LOGML #Geometry #MachineLearning #SummerSchool
Our work on using algebraic topology for interpreting neural population activity has been featured as an NSF Math Institutes research highlight from ICERM @chadgiusti @robertghrist @ICERM mathinstitutes.org/highlights/int…
Want to mentor for a project at the interface of geometry and machine learning? Mentor applications close November 17th. Find out more at logml.ai and apply: forms.gle/HaHrY6JYpqn4UU…
Very excited for the return of LOGML next year – 2022 was amazing. Strongly encourage all those interested in mentoring to apply, especially those in the applied topology and topological deep learning communities!
Very excited for the return of LOGML next year – 2022 was amazing. Strongly encourage all those interested in mentoring to apply, especially those in the applied topology and topological deep learning communities!
New preprint "The Topological Properties of the Protein Universe". Work carried on by PhD student @DegnbolMadsen, and with @syzmath, @theosysbio @DrDouglasPires and others biorxiv.org/content/10.110…
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Vincent Grande @VincentPGrande
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171 Followers 4K Following Seeker of knowledge. Trying my best to do what is right.
Michal Tal, PhD @ImmunoFever
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SpatialBiologyInteres... @SpatialBioIG
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Bernardo Chombo Álva... @ChombOmics
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Jiangning (John) Song @supercs08
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Stefan Florian @nairolf_nafets
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Juho Kim @juhokim
278 Followers 1K Following Machine learning & health AI & computational biology; PhD UIUC
The Innovation | Medi... @Innov_Medicine
254K Followers 14K Following The Innovation Medicine is a new journal on medical science from The Innovation Group, a sister journal of The Innovation @The_InnovationJ. #Medicine #Science
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Zongxu Zhang @zongxu_zhang
70 Followers 532 Following Ph.D. student at Peking University @PKU1898 Cancer genomics|Spatial omics|Previous major in math
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12 Followers 23 Following Doctoral student in maths, interested in applied topology, geometry, and algebra. He/him.
Oliver McCallion @olivermccallion
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Iolo Jones @iolo_jones
798 Followers 141 Following PhD student in geometry / geometric data analysis and ML @durham_uni
Prof. Christina Pagel... @chrischirp
180K Followers 919 Following Prof Operational Research @UCL_CORU, . Member of @independentsage. only posting now at chrischirp at bluesky. https://t.co/nNW5zMenx2
Dr. Sarah Tymochko @SarahTymochko
601 Followers 293 Following Postdoc at UCLA studying TDA, dynamical systems, opinion dynamics, and network science. She/her. Find me on bluesky at the same handle!
Jason D Lotay @jdlotay
420 Followers 244 Following Works on geometry mainly in 4, 7 and 8 dimensions, trying to find best shapes, sometimes using flows. Inspired by physics and looks for art connections.
Sam Power @sp_monte_carlo
19K Followers 7K Following Lecturer in Maths & Stats at Bristol. Interested in probabilistic + numerical computation, statistical modelling + inference. @OnlineMCSeminar. (he / him)
Guadalupe Gonzalez @justguadaa
472 Followers 494 Following Machine Learning Scientist @PrescientDesign | @Genentech | @Roche. @ImperialCollege PhD
Victoria Cox @ToriCoxSTEM
308 Followers 421 Following Infectious Disease Epidemiologist 🦟🧬🦠 @MRC_Outbreak @ImperialCollege. Global health | Sci comm | STEM ambassador 🌎🗣
kelly maggs @kellymaggs7
124 Followers 118 Following math PhD at @EPFL working in topology, ML and comp bio
Lida Kanari @LidaKanari
1K Followers 1K Following Topological Data Analysis and Computational Neuroscience. Group leader, Blue Brain Project, EPFL
Abel Jansma @Abelaer
706 Followers 1K Following Emergence and compositionality in complex and living systems || Fellow @emergenceDIEP, University of Amsterdam || prev at MPI Leipzig & Un. of Edinburgh
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1K Followers 3K Following I came to grad school to make lifelong besties 🤗 @UPennGCB PhD + @Wharton Data Science MA
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216 Followers 169 Following PhD student @ImperialMed and visiting researcher @HarvardDBMI, Artificial Intelligence and Computational Neuroscience
LOGML Summer School @LogmlSchool
2K Followers 631 Following London Geometry and Machine Learning, 7-11 July 2025. Tutorial sessions and talks by prominent researchers in the field of #geometric #machinelearning
Titiksha Mohanty. @titikshamohanty
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Ana Diamond (@anadiam... @AnaDiamondx
5K Followers 2K Following AH Fellow @StAntsCollege @UniofOxford | Currently writing a book for @CanongateBooks (UK) & @simonschuster (US) Not here as often anymore. On IG: @anadiamondx
Navoneel Sen @NavoneelSen
66 Followers 157 Following PhD @KavliOxford, @BalliolOxford working with @BeneschResearch and @SKhalidLab. Biophysical Chemistry 👨🏽🔬 Computational Biophysics 🧑🏽💻
Hadrien Oliveri @HadrienOliveri
379 Followers 481 Following Applied mathematician | Group Leader @mpipz_cologne ➡️🚪🦋 https://t.co/tKHaF4x4Vc
Konstantinos Barmpas @NtinosBarmpas
464 Followers 1K Following Postdoc Researcher at @imperialcollege working on #ML #BCIs / ML Engineer at @CogitatLtd / PhD from @ICComputing / Previously: @ETH & @imperialeee
Chao Chen @ChaoChenSBU
310 Followers 193 Following Faculty @stonybrooku @sbubmi @sbucompsc; Studies TDA; Topology and Geometry in Machine Learning and Biomedical Image Analysis
Matthew Cotton @matthewwcotton
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Nina Miolane 🦋 @ni... @ninamiolane
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Claire T. Coulthard @C_Coulthard98
67 Followers 155 Following Final year PhD student at the University of Oxford @OHaregroup 26 • She/Her • 🇸🇬🇬🇧 🌿🌾 I make layered double hydroxides and bad reaction images
Jane Ivy Coons @JaneIvyCoons
46 Followers 23 Following Mathematician working in algebraic statistics at St John's College, University of Oxford.
Dr. Liz Munch @elizabethmunch
2K Followers 2K Following Mathematician. Assoc prof in @CMSE_at_MSU studying TDA. 55N31, 62R40. Mother of 2 dragons. Half of a 2-body opportunity. She/her.
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9K Followers 7K Following Professor of Algorithmic and Microbial Genomics at the University of Bath. Pathogens, genomics, genome graphs, antibiotic resistance, algorithms,data structures
Dr. Aras Asaad @Aras121
750 Followers 2K Following Mathematician in Oxford Drug Design @OxDrugDes Using Topological Data Analysis in Designing Drugs. AI Researcher. H.Research fellow @ Buckingham Uni.
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