MicrobiomeDB @microbiomeDB
MicrobiomeDB is a free #datamining and #dataviz web resource and R package for interrogating #microbiome and #metagenomic studies. A project from @hostmicrobe. microbiomeDB.org Philadelphia, PA Joined September 2016-
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Excited to announce the beta release of our new MicrobiomeDB R package! This package is intended to be companion to our @microbiomeDB website and provides convenient, programmatic access to all of our curated 16S and shotgun metagenomic datasets. #microbiome #rstats #dataviz
Haven't posted here in a while, but lots of exciting things happening with our @microbiomeDB project! Release 34 rolled out the door last week and debuts a new differential abundance app. Check it out with your own data, or any of our curated datasets! #dataviz
We are aware of and are working to address an issue that results in our system emails being rejected by users’ gmail accounts. Stay tuned.
Release 27 is live! 🎉, featuring new shotgun metagenomic data from over 1000 samples collected as part of ongoing studies in Niger and Malaysia. Check it out!
📢Join us for a free virtual workshop to learn how to use epidemiological data on ClinEpiDB (a new and improved version✨) and related @microbiomeDB data. Register today! forms.gle/f1Fppc85go8yAK…
MicrobiomeDB ✨v23✨ is now live and includes new metagenomic data from over 1200 stool samples, as well as our first mosquito #microbiome study. Check it out!
Exciting release for our @microbiomeDB resource! Includes shotgun metagenomic data from @hmpdacc Phase I (741 samples from 103 volunteers) and @BanfieldLab's huge #NICU necrotizing enterocolitis study (1118 samples from 115 infants). Check it out!
Exciting release for our @microbiomeDB resource! Includes shotgun metagenomic data from @hmpdacc Phase I (741 samples from 103 volunteers) and @BanfieldLab's huge #NICU necrotizing enterocolitis study (1118 samples from 115 infants). Check it out!
We are pleased to announce the release of ✨ClinEpiDB 17! ✨New features include a Data Access Dashboard that allows study teams to easily control who gets to access their data on our platform.
We are excited to announce the release of MicrobiomeDB 22, featuring new shotgun metagenomic data from nearly 2000 samples! In addition, this release includes numerous improvements to our #Shiny apps.
If you missed our @microbiomeDB webinar with @NIAIDBioIT today, don't sweat it! You can watch the recording. Learn how to process and analyze 16S #microbiome data in your web browser. vimeo.com/546055765
Reminder, it's not too late to register for Clair Null's presentation on #WASH benefits which starts in one hour! register.gotowebinar.com/register/53662…
@microbiomDB is teaming up with @NIAIDBioIT to host a free 1hr webinar on web-based tools for #microbiome data analysis. Learn to go from raw reads to data visualizations without any coding. Don't think it's possible? Register below and tune in to see! bit.ly/microbio-online
On April 20, one week from today, we kick off our webinar series with a presentation from Dr. Samuel Gonahasa on #malaria in Uganda. Register here! register.gotowebinar.com/register/53662…
From a new paper by @moorejh and team at UPenn: “Embedding AutoML tools within epidemiology platforms like ClinEpiDB would empower users to directly perform sophisticated analyses...” #malaria #epitwitter Read the paper here- ssph-journal.org/articles/10.33…
Daniel Beiting @hostmicrobe
3K Followers 2K Following Scientist working at the intersection of immunology, microbiology and genomics. Associate Professor @PennVet. Tech. Dir. of CHMI. Tweets are my own.
Igor Brodsky @BrodskyIgor
8K Followers 2K Following Innate immunity/host-pathogen interactions. Husband, father, immigrant. #BlackLivesMatter #stopaapihate @PennVet Pathobiology @brodskyigorlab.bsky.social
silverman lab @LabSilverman
1K Followers 1K Following The Silverman laboratory studies how the early life microbiome educates the immune system to prevent infection and autoimmunity
Ylenia Vassallo @ylenia_vassallo
13 Followers 58 Following Conservation Scientist- Microbiology🧬 PhD student in Cultural Heritage, Sapienza University of Rome
Subhalakshmi Kandavel @Subha_Bio
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Noya @Noya32975767786
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Crystel_Hajjar @CrystelHajjar
666 Followers 5K Following @4womeninscience ambassador @LOreal-@UNESCO 👩🏻🔬 @YLP_UNDP alumna @undp_lebanon #YLP6 #IamYLP #YLPLeb #volunteerSDGs #2030Agenda #TogetherWeCan💙
Djoser Genomics @DjoserGenomics
33 Followers 650 Following Exploring #ComputationalBiology & #Bioinformatics + Documenting my learning journey | Built by @Nour_Rihan_
Hena Jose @henagils
81 Followers 384 Following Exploring healthcare, digitalhealth, genomics, Lifesciences and Data Science Mother to two wonderful daughters and a Catholic Own a Blog: https://t.co/3couxUwd47
Anielle Ferrari ani @anielleferrari
6 Followers 42 Following
Andreia Albuquerque W... @albuquerqueafrr
1K Followers 1K Following Off twitter @albuquerqueafrr.bsky.social
Leticia Cortés @LeticiaCorts1
7 Followers 213 Following
Lemon @Lemon8986968174
68 Followers 4K Following
Mar Benavides @Mar__Benavides
2K Followers 3K Following Microbial oceanographer @bridgesocean @NOCnews Associate Editor @aslo_org #ASLO_letters Views are my own
Turjya-Biostatistics @BiostatTurjya
30 Followers 392 Following Passionate biostatistician 📊 | Statistical wizard with a love for research 🧪 | Making sense of numbers in the world of Biology 🧬 #Biostatistics #DataScience
Devendra Paudel @DevendraPaude12
49 Followers 620 Following Postdoctoral Research Fellow at Johns Hopkins Bloomberg School of Public Health
Dwi P Rahmawati @dwiprahmawati
392 Followers 235 Following A mere human being, tryna figure out how the world works.
Sam Miller, Ph.D. @MicrobeMiller
46 Followers 257 Following Husband | Dad | Postdoctoral Researcher - OSU - Elshahed Laboratory | Former - OU - Lawson Microbial Systematics Laboratory
Luuk van Ooijen @LTVO
98 Followers 734 Following
Wagner Luiz dos Santo... @Mosses_ecology
21 Followers 90 Following
Anabel Ordaz @mvzaordaz
3 Followers 104 Following
Valeria Castaldi @ValeriaCastal12
167 Followers 724 Following PostDoc @yale MCDB • Plants, peptides & microbiomes @uninait @tugraz • I care more about Drosera than the origin of all the species in the world
Flavia @FlaviaPinzari
72 Followers 179 Following
asdaweabaweagasd @asdfqwrq45g892
2 Followers 289 Following
Tsedenia Denekew @DenekewTsedenia
87 Followers 329 Following Microbiology @ UC Berkeley Biology & Social Research and Public Policy @NYUAbuDhabi '22 🇪🇹 🇦🇪 🇺🇸
Deepak Shaw @DShaw_Mangrove
1K Followers 6K Following Ph.D Candidate@MSSRF 🇮🇳Interested In Bacterial Biosynthesis Of DMSP and DMS (Climate-cooling gas) ln Mangrove Ecosystem🌊🌿🦠🕵🧫🔬🧪🍄🧬💻📊Alma Mater-BHU/CU
Leo Lahti @antagomir
2K Followers 3K Following Prof. in Data Science, Turku, Finland. Analysis of complex natural and social systems. @[email protected] + Bluesky + Threads + LinkedIn
Stephania Tsola @StephaniaTsola
365 Followers 1K Following Full-time microbe watcher and keeper of eppendorf tubes🧫🧪PostDoc @QMUL researching the microbiology of climate active gases (DMS + methane)🦠🥼 she/her
Dr. Koty Sharp @SharpKoty
1K Followers 1K Following Marine microbial ecology, corals, symbiosis, microbiomes, Astrangia poculata. She/her/hers. @Mtholyoke @Scripps_Ocean alum. Director, @myrwu CEED/Assoc Prof.
Georgios Kitsios @KitsiosMd
743 Followers 1K Following Pulmonary and Critical Care Med doc, Assistant Professor of Medicine at Univ of Pittsburgh
JB Quijano @jbquij
183 Followers 1K Following
Samir Giri @iSamirgiri
887 Followers 1K Following Postdoctoral Fellow @TypasLab @EMBLHeidelberg Ecology & Evolution of microbial communities | Microbiome| Culturomics| microbiome-targeted therapy🦠🧫🔬🧪💊💩🧬
Mindy Engevik @micromindy
3K Followers 4K Following Microbe-mucus microbiologist. 1 of the 3 Engevik scientist sisters @thekengevik @AmyEngevik. MUSC Assistant Professor #sisterlab #EngevikEmpire
Abigail Graetz @AbigailGraetz
41 Followers 102 Following PhD student with Team Schwessinger at the Australian National University. Here for microbiomes, plants, fungal pathogens, and music from ten years ago.
João Sobral @JM_Sobral
278 Followers 808 Following Science | Genomics | NGS Unit | Family | Music | Photos | @jsobral.bsky.social
Indra Roux @IndraRoux
1K Followers 3K Following Now at IndraRoux.Bsky 🦋 - Postdoc @Cambridge_Uni 🇬🇧 PhD @SMS_UWA 🇦🇺 Biotech @UNQoficial🇦🇷 #Microbiology #EngineeringBiology She/her Latinx
Piotr Nowak @PiotrNo14789634
44 Followers 226 Following ID Physician - Scientist at Karolinska University Hospital
Jessica Portillo @SciPortillo
97 Followers 226 Following PhD Candidate in @ValdiviaLab | @DukeBioCoRE | @DukeMGM | BWF GDEP | host-microbe interactions
Kate Bowie, PhD @katerbowie
203 Followers 346 Following NLM/NIH Biomedical Informatics Postdoctoral Fellow @Yale | Previously @OHSUSOM | Pathogens and Public Health | @chelseafc fan 💙
Calum Bridson @CalumBridson
42 Followers 258 Following Passion for data analysis and microbiomes, especially their role in evolution, health and ecosystem processes.
Kyong T. FAM🇺🇦 @KyongFAM
770 Followers 2K Following 🇻🇳🇺🇦Postdoc, Hang lab @scrippsresearch| PhD @Lab_Klymchenko🇫🇷| Chemical biology of microbiota #scienceforabetterlife
Nicholas Kiulia, PhD @kiuliaviridae
332 Followers 5K Following Microbiologist w/ interest & expertise in genomic surveillance, infectious diseases, microbiome, biogeochemistry, molecular ecology & public health policy.
Kishan @KhemKishan
582 Followers 5K Following MedTech Innovations | Coffee | Deep Space | dopamine డాట్calm
Naveen Kachroo @drnaveenkachroo
220 Followers 325 Following Endourologist at Henry Ford Health System | Urology Residency @HenryFordHealth, Endourology Fellowship @CleClinicUro | @UniofNewcastle and @Cambridge_Uni Alum
Fauzan Ahmed @Fauzan5038
9 Followers 321 Following
dose dependent @sabonabs
224 Followers 365 Following phd candidate | mechanosensation and stem cell biologist | part-time immunologist 🇪🇹
Amy Sweeny @arsweeny
1K Followers 1K Following Within-host communities & disease // @royalsociety University Research Fellow at @SBSatEd // she/they 🏳️🌈 https://t.co/1T2bfBjS0m
Jonathan Eisen @phylogenomics
63K Followers 14K Following Professor @UCDavis studying #phylogenomics & function of microbes & #microbiomes. Other: #BirdPhotography #RedSox #Type1. Past: @harvard @stanford @JohnsHopkins
ARCHIVED - NASA's Per... @NASAPersevere
3.0M Followers 39 Following This account has been archived. Follow @NASAMars to get the latest updates on the Perseverance rover’s mission.
KBase @DOEKBase
2K Followers 827 Following Find the Dept of Energy Systems Biology Knowledgebase on LinkedIn at https://t.co/nuCJF6irCB.
ClinEpiDB @ClinEpiDB
435 Followers 665 Following ClinEpiDB is an open-access clinical epidemiological data platform. We promote #datasharing and #dataviz of global health studies. 📊 A @VEuPathDB project.
OBO Foundry @OBOFoundry
371 Followers 86 Following The Open Biological and Biomedical Ontology (OBO) Foundry Community development of interoperable ontologies for the biological sciences
Jessica C Kissinger @jcklab
667 Followers 258 Following Evolutionary genomicist; Data wrangler; Co-I of @veupathdb, Member of @CTEGD, @uga_genetics and @uga_IOB; Mother, daughter, wife & scuba diver.
QIIME 2 @qiime2
3K Followers 0 Following Announcements, tech support, community & discussion can always be found on the QIIME 2 Forum (https://t.co/U2iHan1zR9).
National Institute of... @NIST
90K Followers 473 Following NIST promotes U.S. innovation & competitiveness by advancing measurement science, standards & tech to enhance economic security & improve our quality of life.Trends for United States
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