sysbiobigunipd @sysbiobigunipd
Sysbiobig is a research group of the Department of Information Engineering, University of Padova. PI: Barbara Di Camillo. sysbiobig.dei.unipd.it Padova, Italy Joined April 2021-
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Congratulations to Sara Poletto, who today successfully passed her PhD midway evaluation at @UniPadova! Her work, developed within the @REDDIE_Diabetes project, focuses on real-world evidence and simulation modelling in #Bioengineering. Onwards to the final year!
Great to see #BITS members at #ISMBECCB2025, the Conference of the International Society of Computational Biology in Liverpool! Congrats to Giulia Cesaro, Mirko Treccani, Leonardo Morelli & Laura Veschetti for presenting at the NetBio, Transmed, HitSeq & iRNA sessions!
A strong tour by @GiuliaCesaro4 on cell cell Communication and intra celular signaling at ISMB
🙏 Grateful for the great engagement at our #CellCellCommunication #tutorial at #ISMBECCB2025! See you next week in #Liverpool in person!👋 Organizers: @GiuliaCesaro4, @shin_nagai, Mayra Ruiz, @vanvanka123 , Giacomo Baruzzo, Barbara Di Camillo
🚀Our new paper is out in @NAR_Open #Genomics and #Bioinformatics! We present a #fast, #memoryefficient #framework to analyze changes in cellular communication across conditions from #scRNAseq data, with a user-friendly #ShinyApp. 📄Read the full paper: doi.org/10.1093/nargab…
🔥It is a pleasure to announce CrossTalker2.0🔥. New features includes CCI statistical tests, new visualizations, intracellular signalling, pathway analysis, a python version & tutorials based on heart and bone marrow fibrosis data costalab.github.io/CrossTalkeR/ by Vanessa & @shin_nagai
Had a wonderful time at #AIME2025 with inspiring talks, top researchers, and great energy! We contributed to the scientific program with four research papers, covering a range of topics from federated learning to event prediction in ALS!
📢 Attending #ISMBECCB2025 in #Liverpool ? Don’t miss our #tutorial:"Computational approaches for cell-cell communication from #singlecell & #spatialtranscriptomics" in collaboration with CostaLab @vanvanka123 🗓 July 15 | 🕘 09:00 BST | 💻 Virtual 🔗 iscb.org/ismbeccb2025/r…
🚀 Great time at @BITS_bioinf Conference 2025 in #Naples! We presented two exciting works: 🔹 Giacomo Baruzzo on #quickSparseM for sustainable omics computing 🔹@GiuliaCesaro4 on #singlecell pathway reconstruction Thanks to all who stopped by! 🙌 #BITS2025
⌛️Few days left to register for the #FirstInternationalBioHackathon of #BITS2025! 👉Important: To participate, you must complete the final registration form: forms.gle/GF7P2N7teYMviw… ⚠️Previous pre-registrations will NOT be considered 📅Deadline: June 1, 2025 @young_infolife
This is a very nice approach. A few other methods perform multiscale analysis for scRNA-seq . See our latest work for a optimal transport/GM-VAE based approach, which includes a comprehensive benchmark on single cell disease atlas @njwfish tinyurl.com/zv4p3bjf
This is a very nice approach. A few other methods perform multiscale analysis for scRNA-seq . See our latest work for a optimal transport/GM-VAE based approach, which includes a comprehensive benchmark on single cell disease atlas @njwfish tinyurl.com/zv4p3bjf
🚨 Registration is OPEN for the 1st International BioHackathon @ #BITS2025! 📅 June 10, 14:00 (on the eve of #BITS2025) 📍 Naples, Italy 🤝 Team up, learn, solve real challenges in bioinformatics! 🔗 Register by June 1: forms.gle/GF7P2N7teYMviw…
🚀 Happy to share our latest work published in Bioinformatics Advances! DRMAAtic bridges bioinformatics web tools with HPC/cloud via a flexible, REST-enabled API. No sysadmin skills required — just run your jobs, anywhere. 🔗 doi.org/10.1093/bioadv… #OpenScience
Our group, together with @vanvanka123, is excited to host a virtual #tutorial at #ISMBECCB2025: "Computational Approaches for Deciphering Cell-Cell Communication from Single-Cell Transcriptomics and Spatial Transcriptomics Data" 🔗Learn more: iscb.org/ismbeccb2025/p…
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