ssuthram.bsky.social @SSuthram
Computational Biologist. San Jose, CA Joined October 2012-
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ssuthram.bsky.social retweeted
"Most Indians today harbor ancestry from three main sources -- Indigenous Andaman Islanders, ancient Iranian-farmer and Steppe-pastoralist groups" Very Interesting study.. congratulations to all the authors! cell.com/cell/fulltext/…
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ssuthram.bsky.social retweeted
Cells are dynamic, messy and context dependent. Scaling models across diverse states needs flexibility to capture heterogeneity Introducing State, a transformer that predicts perturbation effects by training over sets of cells Team effort led by the unstoppable @abhinadduri
ssuthram.bsky.social retweeted
Celebration of the life of Atul Butte. Join colleagues from three universities to celebrate him at 10 am PST on Saturday.
ssuthram.bsky.social retweeted
The preliminary findings of the GenomeIndia project, in which CCMB played a key role, is now out @NatureGenet: nature.com/articles/s4158…. This massive, multi-institute effort generated whole genome seq data of 10K healthy Indians & will pave way to new genomics research in India.
ssuthram.bsky.social retweeted
From great collaborations come great things. Excited to share Segger, the solution to segmentation of spatial transcriptomics (ST) data, with the @StatGenomic and @MoritzGerstung labs, spearheaded by the great @andrewrmoorman and @HeidariElyas. biorxiv.org/content/10.110…
ssuthram.bsky.social retweeted
1/9 New preprint out! 🍳 Our team at @embl, @DKFZ, and @MSKCancerCenter built #segger—a fast, accurate cell segmentation tool for ST. It’s a transcript-to-cell link predictor that matches transcripts to their cell origins in a snap!
1/9 New preprint out! 🍳 Our team at @embl, @DKFZ, and @MSKCancerCenter built #segger—a fast, accurate cell segmentation tool for ST. It’s a transcript-to-cell link predictor that matches transcripts to their cell origins in a snap! https://t.co/L3OBgFJKzR
ssuthram.bsky.social retweeted
Some mock research that seems obscure, like studying the wing of a fly. Some claim that science is unreliable because scientists change their minds. Some fault science for not providing immediate answers. But these criticisms all stem from misunderstandings of how science works.
ssuthram.bsky.social retweeted
Interested in single cell genomics but need help getting started? Check out my lab's Single Cell Genomics Day on April 25. Talks will feature recent exciting computational and experimental advances and will be live-streamed at satijalab.org/scgd. Please RT/spread the word!
ssuthram.bsky.social retweeted
If u think this work is cool, note that it was done by grad students, PDs and staff in academic labs funded by federal tax payer dollars. If no federal funding, a lot less of this kind of research. Use your voice to protect federally funded research which is under attack. Thank u
If u think this work is cool, note that it was done by grad students, PDs and staff in academic labs funded by federal tax payer dollars. If no federal funding, a lot less of this kind of research. Use your voice to protect federally funded research which is under attack. Thank u
Just moved to bsky. Hoping science Twitter transitions to bsky
Join me and donate to @KQED today to ensure they can continue providing quality news and entertainment to Northern California. donate.kqed.org/donate
ssuthram.bsky.social retweeted
Interested in LLMs for genomic research but don't know where to start? looking for a review/survey to get started in this field? 👇👇😀 I am very excited to share that our review paper titled "To Transformers and Beyond: Large Language Models for the Genome" is now available as…
ssuthram.bsky.social retweeted
एक अहंकारी तानाशाह, कम-पढ़े लिखे व्यक्ति से देश को बचाना पड़ेगा @RahulGandhi को Lok Sabha की सदस्यता से बर्खास्त कर देना कायराना है हम इस Judgement से सहमत नहीं हैं देश में सभी डरे हुए हैं अब लोगों को खड़ा होना पड़ेगा, मेरी लोगों से Appeal—ये देश सबका है —CM @ArvindKejriwal
After 20 yrs in this country, finally visiting #Boston for the Tri-Omics Summit!
Missed posting this yesterday. Join Gilead in celebrating National Intern Appreciation Day. We’re honored to work with such a talented group of tomorrow’s leaders. Really happy to work with Kachi Nwogu ! #gileadlife #InternAppreciationDay lnkd.in/g3SVjd_z
I am looking to hire an Bioinformatics Infrastructure Engineer (Contractor) for my team. Job description is attached. #Bioinformatics #infrastructureengineer #dataengineer #Bioinformaticsengineer lnkd.in/g2kZYeT5
Planning my first in-person conference in over 2 yrs. Any suggestions? #spatialtranscriptomics #SingleCell
ssuthram.bsky.social retweeted
10 Visuals That Will Change Your Life 1.
Looking for a Bioinformatics Data Engineer (Contractor) position in my team. Some key requirements: * Proficient in statistical and scripting programming languages, such as R, Python, etc. * Experience in working with NGS data and developing/implementing…lnkd.in/dU9W2b4G
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