Yunyang @_YunyangLI
PhD Student @ Yale Joined June 2022-
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Introducing Nequix MP, a new foundation model for materials. Example of using Nequix to simulate the dissolution of a NaCl nanocrystal in water: 1/n
Type 2 diabetes affects hundreds of millions globally. Our research explores a suite of ML models that show the potential of using wearable data & routine blood tests to effectively predict insulin resistance, a major precursor to type 2 diabetes. More: goo.gle/4oDX9MS
Introducing DeepPolisher — in collaboration with UC Santa Cruz Genomics Institute, we developed this new open-source method to improve genome assembly accuracy. It reduces indel errors by 70% and total assembly errors by 50%. Learn more: goo.gle/3Hn8PCG
Let your wearable data "speak" for itself! Introducing SensorLM, a family of sensor-language foundation models trained on ~60 million hours of data, enabling robust wearable data understanding with natural language. → goo.gle/4lSLwQi
🚀 Launch day! The NeurIPS 2025 PokéAgent Challenge is live. Two tracks: ① Showdown Battling – imperfect-info, turn-based strategy ② Pokemon Emerald Speedrunning – long horizon RPG planning 5 M labeled replays • starter kit • baselines. Bring your LLM, RL, or hybrid…
Congratulations to Yale CS faculty/researchers on receiving the Best Paper Award at COLT 2025! 🎉👏👏 #YaleCS #COLT2025 #AI #MachineLearning
Congratulations to Yale CS faculty/researchers on receiving the Best Paper Award at COLT 2025! 🎉👏👏 #YaleCS #COLT2025 #AI #MachineLearning
For a short ML-focused introduction to this paper, I wrote a short blog post ae-foster.github.io/posts/2025/06/… (3/n)
Posting my talk tomorrow at the AI4Chemistry Summit at NYU lectures.gersteinlab.org/summary/AI-for… Lots of new slides on computing small molecule Hamiltonians (from @_YunyangLI) & predicting macromolecular misfolding
A good read at weekend: a recent benchmark of perturbation analysis with machine learning (arxiv.org/pdf/2408.10609). Perturbation analysis is considered one of the key testbed for virtual cells with genomic foundation models. Although perturbation prediction remains an open…
ChatGPT now can analyze, manipulate, and visualize molecules and chemical information via the RDKit library. Useful for scientific work across health, biology, and chemistry.
I am pleased to announce a new version of my RL tutorial. Major update to the LLM chapter (eg DPO, GRPO, thinking), minor updates to the MARL and MBRL chapters and various sections (eg offline RL, DPG, etc). Enjoy! arxiv.org/abs/2412.05265
End to end differentiable protein structure alignment! @JeannefaustineT @sokrypton
1/4 🚀 New #ICLR2025 SPOTLIGHT ALERT Gerstein Lab presents “Enhancing the Scalability & Applicability of Kohn-Sham Hamiltonians”—led by @_YunyangLI & Z Xia & L Huang & J Zhang & @MarkGerstein. Joint work with @MSFTResearch.
Our paper on prediction of phase-separation propensities of disordered proteins from sequence is now published
We’ve been excited about discrete flow matching as an alternative to discrete diffusion for biologics design—but how do you scale it to larger vocabularies and control generation? 🌊🌡️Introducing Gumbel-Softmax Flow Matching from our brilliant @_sophia_tang_! 👇 📜:…
Extremely excited to give a glimpse of what we've been working on over the past 2 years: unifying structure-prediction and de-novo generation. Neo-1 is an all-atom, fully generative model
Extremely excited to give a glimpse of what we've been working on over the past 2 years: unifying structure-prediction and de-novo generation. Neo-1 is an all-atom, fully generative model
Big news from @vant_ai: Neo-1 integrates SOTA structure prediction and all-atom molecular generation into a single unified model -- an industry first to the best of my knowledge: vant.ai/neo-1
As we age, we accumulate somatic mutations in our cells (mutation clock) and DNA methylation changes (epigenetic clock). They correlate and interact nature.com/articles/s4358… @NatureAging

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Michael Bronstein @mmbronstein
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Seongsu Kim @seongsukim_ml
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Weilong Chen @vollon3
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AI4OPT @AI4OPT
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Siwei Wu(吴思为�... @siweiwu7
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Ran Meng @RanMeng_m
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Mark Gerstein @MarkGerstein
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Jianmin Wang(王建�... @Jianmin4drugai
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Gaute Einevoll @GauteEinevoll
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Molecular Machine Lea... @molecularML
3K Followers 3K Following Team-run account of the Molecular ML research group led by @fra_grisoni | #AI for Drug Discovery | Doing all this at @tueindhoven & @ICMStue
Nebeautet @nebeautet21146
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VanessaFinesser @VanessaFinessaX
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NotNaomi @NotNaomi0
879 Followers 1K Following Naomi or not, you don't know me... Came here to learn more about Web3! #womenintech
IsabellaDEX @IsabellaDEX
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Nin Khodorivsko @NinKhodorivsko
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Raman Dutt @RamanDutt4
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Kushal R. Bhandari @kushalrbhandari
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Yan @Yan_UpUp
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Sarowar @smsnobin77
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Akinsete Motunrayo @Harkinsete
161 Followers 525 Following AI & ML Researcher | Product | Tech | Business/YouTube Link: https://t.co/XtzrxFN2We
Alexandru Buburuzan @ABuburuzan
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Howard_C @HowardC84902019
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Kevin Patrick Murphy @sirbayes
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Eureka Labs @EurekaLabsAI
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Flatiron Institute @FlatironInst
6K Followers 255 Following Advancing scientific research through computational methods and software tools. Centers: #FlatironCCA, #FlatironCCB, #FlatironCCM, #FlatironCCN and #FlatironCCQ
Prof. Akiko Iwasaki @VirusesImmunity
213K Followers 2K Following We study antiviral immunity and viral disease pathogenesis. #COVID19 #longCOVID #vaccines @HHMINEWS @YaleIBIO @YaleMed @YaleCII
Huxe @gethuxe
2K Followers 5 Following The most personalized content on the internet: made only for you
AORUS @AorusOfficial
426K Followers 307 Following | Official X of AORUS | Follow us for daily updates on all things GIGABYTE/AORUS! 🧡 |
任天堂株式会社 @Nintendo
5.5M Followers 34 Following 任天堂からのお知らせや、ホームページの更新情報をお伝えします。 ご質問・お問い合わせにはお答えしておりませんのでご容赦ください。
Max Zhdanov @maxxxzdn
2K Followers 382 Following busy scaling on two GPUs at @amlabuva with @wellingmax and @jwvdm
Nature Biomedical Eng... @natBME
52K Followers 56 Following News from the editors of Nature Biomedical Engineering, a journal for researchers, engineers and clinicians interested in human health. Launched in Jan 2017.
Wu Tsai Institute | Y... @WuTsaiYale
3K Followers 363 Following Our goal is to understand cognition. #KnowTogether
Žiga Avsec @Avsecz
2K Followers 512 Following Research scientist at @GoogleDeepMind. Previously PhD student @gagneurlab working on deep learning methods for genomics.
Sawyer Merritt @SawyerMerritt
955K Followers 401 Following EV/space/tech news. Bringing you the latest news in a single, easy-to-read feed. $TSLA investor & Model Y owner.
Sai Zhang @saizhang0
2K Followers 1K Following Incoming Asst Prof @YaleBIDS @YaleMed | Asst Prof @UF | Prev: Postdoc & Instructor @StanfordMed | PhD @Tsinghua_Uni | #AI × #Biomed | Views are my own.
Grant Sanderson @3blue1brown
411K Followers 362 Following Pi creature caretaker. Contact/faq: https://t.co/brZwdQfdif
Sergey Ovchinnikov @sokrypton
16K Followers 4K Following Scientist, Assistant Professor @MITBiology, #FirstGen, ProteinBERTologist, 🇺🇦 No Human is illegal. Moving to: https://t.co/sow6IRD3jj
Minhyuk Sung @MinhyukSung
2K Followers 630 Following Associate professor @ KAIST | KAIST Visual AI Group: https://t.co/mblvQKFc8t.
Percy Liang @percyliang
84K Followers 417 Following Associate Professor in computer science @Stanford @StanfordHAI @StanfordCRFM @StanfordAILab @stanfordnlp | cofounder @togethercompute | Pianist
Feng Zhang @zhangf
53K Followers 53 Following Engineer and molecular biologist. Curious about the world and optimistic to make it better.
Mike Bloomberg @MikeBloomberg
2.5M Followers 707 Following Entrepreneur, philanthropist, UN Special Envoy for Climate Ambition & Solutions, WHO Amb. for NCDs & Injuries, mayor of NYC, father, grandfather, and data nerd.
Yale CBB @YaleCBB
952 Followers 60 Following Official student-run account of the Yale Computational Biology & Biomedical Informatics (CBB) Program. Join us on Bluesky: @yalecbb.bsky.social
MIT NLP @nlp_mit
4K Followers 51 Following NLP Group at @MIT_CSAIL! PIs: @yoonrkim @jacobandreas @lateinteraction @pliang279 @david_sontag, Jim Glass, @roger_p_levy
VantAI @vant_ai
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Charalampos (Babis) P... @chbpap
1K Followers 178 Following faculty at @Yale | co-director of @YaleACL | chief scientist at @lagrangedev | researching and teaching cryptography and security
Peter Holderrieth @peholderrieth
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Peter J Park @peter_j_park
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Yong Xiong Lab @Xiongosome
468 Followers 95 Following We study host-viral interactions so our bodies can fight #coronaviruses and #HIV @Yale. RTs are not endorsements. FYI Yong doesn’t tweet, his students do!
Sebastien Bubeck @SebastienBubeck
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Frank Noe @FrankNoeBerlin
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Kirill Neklyudov @k_neklyudov
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Joey Bose @bose_joey
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Maximilian Stahl @MaxStahlMD
805 Followers 289 Following Director Leukemia Program @Yale @YaleCancer @SmilowCancer Prior @DanaFarber @harvardmed @MSKCancerCenter @TradIMYale
MLSB (in San Diego) @workshopmlsb
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Learning on Graphs Co... @LogConference
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Arc Institute @arcinstitute
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Tesla North America @tesla_na
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