steven hoffman @hoffman_steven
#SingleCell #spatial #NGS @ultimagenomics but All comments my own Texas, USA Joined February 2011-
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Best practices for @UltimaGenomics Analysis: link.ultimagenomics.com/199ff0
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steven hoffman retweeted
My resignation letter from CDC. Dear Dr. Houry, I am writing to formally resign from my position as Director of the National Center for Immunization and Respiratory Diseases at the Centers for Disease Control and Prevention (CDC), effective August 28, 2025, close of business.…
steven hoffman retweeted
We put a blog post together to tell you about all that went behind the scenes for @arcinstitute's Virtual Cell Challenge: (1) the modality used for genetic perturbations, (2) choice of single cell RNA seq chemistry, (3) which cell line to use for the challenge, (4) which genes to…
steven hoffman retweeted
Most people know that ALS is a deadly disease. But most don't know that an ALS diagnosis is often missed at early disease stages due to lack of specific biomarkers. Now, a plasma proteomic signature of 33 proteins (based on Olink Explore) achieved discrimination of >95%!
steven hoffman retweeted
Mackinac Island in Northern Michigan, where cars are banned and Amazon delivers by horse.
steven hoffman retweeted
🧨Exciting new pre-print! Introducing ppmSeq - cost effective, scalable dual-strand 🧬 sequencing. Scalability & ultra-low error in one! A game changer for somatic genome discovery science and cfDNA clinical apps. Check out thread for deets! @AlexandrePCheng @UltimaGenomics
🧨Exciting new pre-print! Introducing ppmSeq - cost effective, scalable dual-strand 🧬 sequencing. Scalability & ultra-low error in one! A game changer for somatic genome discovery science and cfDNA clinical apps. Check out thread for deets! @AlexandrePCheng @UltimaGenomics
steven hoffman retweeted
A new bioRxiv preprint from the @landau_lab at New York Genome Center showcases the unmatched combination of sensitivity, efficiency, and cost-effectiveness made possible by #ppmSeq. Link to preprint: biorxiv.org/content/10.110… Link to PR: prnewswire.com/news-releases/…
steven hoffman retweeted
Our most popular single cell webinar series is back this summer, and we're offering 5 webinars across 3 time zones so you don't have to miss it. Register below! North America: parse.bio/4n3jWQH Europe: parse.bio/4lwcP1T Asia Pacific: parse.bio/4n3jXUL
Excellent summary of the First BioRxiv pre-print featuring #ppmSeq from @UltimaGenomics
Excellent summary of the First BioRxiv pre-print featuring #ppmSeq from @UltimaGenomics
steven hoffman retweeted
Symphony at Salk is our biggest fundraising night of the year. Salk's iconic campus will turn into a stage for guests to support Salk science and enjoy a performance from the San Diego Symphony and Kristin Chenoweth. Check out last year's transformation for Symphony at Salk,…
steven hoffman retweeted
Unlock the power of bioinformatics! 💻✨ Dive into learning Unix commands & shell scripting to revolutionize your data analysis skills. Don’t miss these essential tips! #Bioinformatics #Unix #Programming
steven hoffman retweeted
We’ve raised $30M to build the foundational dataset for Virtual Cell Models: 1Bn single-cell datapoints, mapping 1M drug-patient interactions, to be shared with one partner. Our goal: Move the frontier - From models to precision medicines that help patients. @tahoe_ai 🧵
steven hoffman retweeted
We’re looking for a lab manager for our growing lab: hhmi.wd1.myworkdayjobs.com/en-US/External… If you’re excited about aging, senescence ans CAR T cells and want to work in a friendly collaborative environment, come join us!!
steven hoffman retweeted
This recent paper shows "Deep-learning-based gene perturbation effect prediction does not yet outperform simple linear baselines" nature.com/articles/s4159… I then saw PerturbNet from Josh Welch's group x.com/labwelch/statu…
This recent paper shows "Deep-learning-based gene perturbation effect prediction does not yet outperform simple linear baselines" nature.com/articles/s4159… I then saw PerturbNet from Josh Welch's group x.com/labwelch/statu… https://t.co/nog3iM1DfC
steven hoffman retweeted
Interested in studying cell differentiation at the cellular level but don't trust your UMAP plots? Try visualizing your cell differentiation in space with our TopoVelo tool!
Interested in studying cell differentiation at the cellular level but don't trust your UMAP plots? Try visualizing your cell differentiation in space with our TopoVelo tool! https://t.co/Kh87tNWQlZ
steven hoffman retweeted
Puns coming at you Armed and Dadly 😎
steven hoffman retweeted
I wrote an end-to-end tutorial to replicate this genomics figure during the last winter holidays 👇 Take a look at the website and follow the step-by-step guide here crazyhottommy.github.io/reproduce_geno…
steven hoffman retweeted
1/ Most students in bioinformatics skip this. But understanding raw NGS data is where everything begins. Here’s why it matters. 🧵
steven hoffman retweeted
Very honored to receive the 2025 ISCB Innovator Award at #ISMBECCB2025 and present our lab’s journey—from mapping cells to modeling their future. Thanks to my amazing team and collaborators—this is our award! 🙌 📝 doi.org/10.1093/bioinf…
steven hoffman retweeted
We are excited to announce that The Myeloid Workshop is back on under ASH this year and will be held on Friday, Dec 5, from 3-7PM. ...👇
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