🔧 Ino de Bruijn 🧬 @inodb
building stuff for cancer genomics: @cbioportal @genomenexus ino.bio Brooklyn, NY Joined March 2012-
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Learn about cBioPortal at #AACR25 next week! Visit us in the Exhibition Hall (Booth 3703) and come see our poster on Sunday afternoon presented by @inodb in the @AACR Project GENIE Use Cases Session (Section 48, Board 3).
@ronny_drapkin @TanjinaKader @JiaRenLin YES! Excellent teamwork studying the development of fallopian tube precursors to high grade serous ovarian cancer. Very proud of the impressive effort by @TanjinaKader, @JiaRenLin, Clemens Hug, and team. A total joy to work with them and colleagues. And a delight to be able to…
This paper is the result of an incredibly fun collaboration with @SantagataMDPhD and Peter Sorger. Led by the fantastic @TanjinaKader with @JiaRenLin, we provide a pre-cancer atlas of Fallopian tube precursors to HGSOC. Don't miss our cbioportal entry of all the data!
This paper is the result of an incredibly fun collaboration with @SantagataMDPhD and Peter Sorger. Led by the fantastic @TanjinaKader with @JiaRenLin, we provide a pre-cancer atlas of Fallopian tube precursors to HGSOC. Don't miss our cbioportal entry of all the data!
Analysis & Visualization of Longitudinal Genomic & Clinical Data from the @AACR Project GENIE Biopharma Collaborative in cBioPortal—read this article featured in the AACR Journals Collection on AI and Data Science. bit.ly/3YrGjG4 @inodb @cbioportal #openaccess
On my way to the Festival of Genomics & Biodata in Boston! Will moderate a session on Data Sharing and present on Longitudinal Clinico-Genomic Data Analysis in cBioPortal leveraging #AACRProjectGENIEBPC data Registration is free, so check it out and come say hi!
On my way to the Festival of Genomics & Biodata in Boston! Will moderate a session on Data Sharing and present on Longitudinal Clinico-Genomic Data Analysis in cBioPortal leveraging #AACRProjectGENIEBPC data Registration is free, so check it out and come say hi!
@inodb (Manager, Bioinformatics Software Engineering, @MSKCancerCenter) will be joining us at #FOGBoston to discuss big data sharing in cancer genomics. Want to hear more? Register now: hubs.la/Q02r2jHL0
If you want to learn more about AACR Project Genie while at #AACR24, read from @inodb on analyzing GENIE data in cBioPortal, and a pair of reviews discussing the use of big data in cancer research: bit.ly/4anrBDq bit.ly/3VKNSGN bit.ly/43Mg3ah @AACR
Stay up to date on the latest @cbioportal news!
Stay up to date on the latest @cbioportal news!
Work with us on the open source @cbioportal for a summer!
Work with us on the open source @cbioportal for a summer!
Single Cells as text? We developed Cell2Sentence, a method that allows training of Large Language Models on single-cell data! biorxiv.org/content/10.110… With @danielflevine @SyedARizvi5688 @sachalevy3 @rahuldhodapkar @YaleSEAS @YaleMed #AI #ML #NLP #genomics #CompBio #singlecell
An enormous thank you to @SamVolchenboum and his @PedsDataCommons team for hosting #ITCR2023 at @UChicago this year. It was an amazing three days with this #CancerInformatics community! itcr.cancer.gov
It's out y'all! A new @cbioportal paper! Super grateful for the opportunity to follow in the footsteps of @gaojj & @ecerami! The article highlights work from tons of people to improve joint longitudinal genomic & clinical data analysis in @cbioportal!
It's out y'all! A new @cbioportal paper! Super grateful for the opportunity to follow in the footsteps of @gaojj & @ecerami! The article highlights work from tons of people to improve joint longitudinal genomic & clinical data analysis in @cbioportal!
Excited to share Monopogen that performs SNV calling from single-cell DNA/RNA/ATAC-seq data, to enable cellular population genetics. nature.com/articles/s4158…. Thanks Rui Chen, @nicholas_navin, @shyam_lab, Li Ding, @czi @cziscience, #HTAN, @NatureBiotech collaborators/friends.
Evaluation of software impact designed for biomedical research: Are we measuring what's meaningful?ncbi.nlm.nih.gov/pmc/articles/P…
Check out the tools! Lmk if you'd like to add any or hate/love the UX :)
These two incredible scientists, Dr. Sarah Suehnholz @OncoKB Senior Scientist & Ritika Kundra, Lead Software Liaison, showcasing @OncoKB w/ dedication & expertise. Meet them at booth 28161 or #ASCO23 poster #171 in Hall A poster 1pm. @gerlach_d we will connect later I’m sure!
These two incredible scientists, Dr. Sarah Suehnholz @OncoKB Senior Scientist & Ritika Kundra, Lead Software Liaison, showcasing @OncoKB w/ dedication & expertise. Meet them at booth 28161 or #ASCO23 poster #171 in Hall A poster 1pm. @gerlach_d we will connect later I’m sure!
Hope you caught our poster abt a new resource linked to @OncoKB & @cbioportal’s Genome Nexus called ReVUE = Repository of Variants w/ Unexpected Effects @ #AACR2023. Led by @inodb @nikolausschultz & me Funded by the ICI Go to cancerrevue.org & submit variants!
Come learn about cBioPortal at #AACR2023: Talks on Saturday by @nikolausschultz at 8:30 AM in Room W224 (#NCIITCR session) as well as by Tali Mazor in Room W311 at 8:45 AM (@AACR Project GENIE session), a poster on Tuesday morning, and a booth in the exhibitor space (#1943).
Debyani Chakravarty, ... @CDebyaniPhD
2K Followers 697 Following @OncoKB Lead Scientist @MSKPathology Assistant Member @sloan_kettering cancer biologist. Mother, wife of @JPayneWrites, daughter & sister. tweets are mine.
Florian Uhlitz @fuhlitz
256 Followers 713 Following Computational Biology Team Lead @Immunaitech - Before w @SohrabShah at @MSKCancerCenter and w @MolSysBio at @ChariteBerlin. he/him @[email protected]
Ignacio Vázquez @ivazquezgarcia
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Torsten Seemann @torstenseemann
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Mick W@tson ↙️ @BioMickWatson
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Elizabeth McKenna @ElizSMcKenna
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Ahmet Zehir @ahmetz
1K Followers 809 Following VP, Bioinformatics @ Natera. Crossfitter, photographer, baker, potter. He, him. 🏳️🌈 (Tweets and views are all mine)
Gavin Ha @GavinHa
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Jian Carrot-Zhang @CarrotJian
646 Followers 417 Following Assistant faculty member, cancer data scientist @mskcc Views my own
Chai Bandlamudi @chaiband
244 Followers 292 Following Assistant Member @MSKPathology | Computational Oncology | Translational Biomarker Discovery | Cancer Genomics | Germline Predisposition to Cancer
Alvaro Quintanal-Vill... @AlvaroQuintanal
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Ajit Johnson Nirmal @ajitjohnson_n
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Nicolas Robine @notSoJunkDNA
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Broad Institute @broadinstitute
99K Followers 4K Following A multidisciplinary community of researchers on a mission to improve human health.
Ricardo Tiecher @rdtiecher
442 Followers 905 Following Advanced Onc Fellow at MSKCC - Gyn Med Onc/EDD; 🇧🇷 Former Med Onc Fellow at USP and Assistant Oncologist at Hosp. Sírio-Libanês; Gaúcho and Grêmio fan
rakshat.sol @singh_rakshat
236 Followers 372 Following research intern @ IIIT Guwahati | curious dev | Google DG | 3x🏆 | building @hiremeet , https://t.co/uoGH84dD9q | shitposting 24×7
Rishi Sulakhe @SulakheRis60920
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MSK Library @MSKLibrary
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arishta jain @arishtajain
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Hunter Shain @ShainLab
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Martha Rotter @martharotter
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Reshma Ramaiah @RRamaiah10
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Raddur Samaddar @SamaddarRaddur
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Farheen @farheen0003
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Mitchell Parker, MD, ... @Mitch_P
793 Followers 2K Following Resident @MSK_RadOnc @pike_lab ☢️ | MD-PhD @DrexelMedicine @FoxChaseCancer 🩺 | Co-Founder @healthuniverse_ 🛸
Seytaez @SeytaezoEbNlx
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Tanjina Kader 🎗️ @TanjinaKader
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Malang @Malang2564582
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Sirthiff @Sirthiff874
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Cloret @Cloret3stKC2t
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Sollauth @Sollauth21EF
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Minsoo Kim @minsoo_kim1
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Sirius A @aaronpsamuel
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Laboratory of Systems... @Harvard_Lab
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黃其晟 @hungqchng1
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JennySilas @2J9qB1s5J1y355I
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KristinSidney @OK5ePULQEEUck5
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Emma Dumont @JKGFG4nxCq8HYs
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VIR GARG @garg_vir
561 Followers 2K Following 21 👨💻, SDE https://t.co/KlbzhlTrnl | Freelancer | x: Languify , Antier solutions | IndiaAI Fellow | NITJ 25
Marlyn @congdon80marlyn
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Emily Shaffer, DO @DrMissWV
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Front Line Genomics @FLGenomics
12K Followers 4K Following Join us in uniting the Genomics community! Our goal is to deliver the benefits of genomics to patients faster
Yize Li @YizeLi7
99 Followers 319 Following @WUSTLmed Cancer Genomics and Proteomics | Statistical Genetics | Multi-omics | Spatial Imaging | Bioinformatics
Nekeighsh @nekeighsh8537
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Federica Persiani @FedericaPersia1
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sweetcalf @sweetcalf153932
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kevin @shirebio
180 Followers 474 Following Founder & CEO at https://t.co/zrD4EDVGOz Business poems: https://t.co/yC3RPRSEvN
Setor Amuzu @SetFelix
409 Followers 2K Following I help make sense of biological data #bioinformatics. Current interests: #cancer, #genomics, #PrecisionMedicine. :)
Poorvi Kaushik @gene_poo
182 Followers 907 Following
Debyani Chakravarty, ... @CDebyaniPhD
2K Followers 697 Following @OncoKB Lead Scientist @MSKPathology Assistant Member @sloan_kettering cancer biologist. Mother, wife of @JPayneWrites, daughter & sister. tweets are mine.
Sohrab Shah @SohrabShah
4K Followers 242 Following Computational oncology, cancer genome scientist, single cell dynamics, Memorial Sloan Kettering Cancer Center. Views are my own.
Dan Landau @landau_lab
11K Followers 3K Following Somatic evolution, cancer genomics, epigenomics (Weill Cornell/New York Genome Center). Hemato-oncologist (NYP). Discl.: https://t.co/7TBNcbcVCP
Lior Pachter @lpachter
47K Followers 2K Following Bren Professor of Computational Biology @caltech. Blog at https://t.co/FFQzhEsmhi. Tweets represent my views, not my employer's. #methodsmatter
Florian Uhlitz @fuhlitz
256 Followers 713 Following Computational Biology Team Lead @Immunaitech - Before w @SohrabShah at @MSKCancerCenter and w @MolSysBio at @ChariteBerlin. he/him @[email protected]
Ewan Birney @ewanbirney
48K Followers 2K Following Deputy Director General of EMBL, Director of EMBL-EBI. I have an insatiable love of biology. @[email protected]. I also work with ONT, Dovetail + GeL.
Memorial Sloan Ketter... @MSKCancerCenter
103K Followers 2K Following One of the world’s leading comprehensive cancer centers. To make an appointment: 877-871-9362
Fabian Theis @fabian_theis
35K Followers 426 Following Computational biologist @HelmholtzMunich, prof @TU_Muenchen & associate PI @sangerinstitute. Dad of 4 and mountain lover. Department news, see @CompHealthMuc
Itai Yanai @ItaiYanai
32K Followers 2K Following Professor at the NYU School of Medicine. Co-host of the 'Night Science Podcast' @nightsciencepod and Co-founder of the Night Science Institute https://t.co/lede3rBmXU
Michael Hoffman @mich... @michaelhoffman
23K Followers 6K Following Chair, Comp Bio & Medicine Program, Princess Margaret Cancer Centre, @UHN. Assoc Prof, Medical Biophysics, University of Toronto. COI https://t.co/CvupKNIjZr
dana_peer @dana_peer
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Ignacio Vázquez @ivazquezgarcia
891 Followers 989 Following Assistant Professor @ Massachusetts General Hospital | Harvard Medical School | Broad Institute. https://t.co/dw27U3looT
Eli Van Allen @VanAllenLab
9K Followers 2K Following Clinical Computational Oncology @DanaFarber @harvardmed @broadinstitute | Chief - Population Sciences | Prev.: @Stanford @UCLA @UCSF | Discl.: https://t.co/EmrHxvg76N
Torsten Seemann @torstenseemann
17K Followers 2K Following Microbial genomics, bioinformatics software, training. A/Prof ORCID: 0000-0001-6046-610X Retro 8-bit computers; VIC=20, C=64, C=128.
Ming "Tommy" Tang @tangming2005
41K Followers 2K Following Director of bioinformatics at AstraZeneca. YouTube at chatomics. On my way to helping 1 million people learn bioinformatics. Also talks about leadership.
Jason Sheltzer @JSheltzer
17K Followers 2K Following Assistant prof at @StanfordMed. Interested in aneuploidy, mitotic kinases, cancer therapeutics, and drug development. Co-founder x2.
Anshul Kundaje (anshu... @anshulkundaje
26K Followers 3K Following Federally funded academic research is the innovation engine of the US economy. Reform is welcome. Destruction will have long term consequences.
Mick W@tson ↙️ @BioMickWatson
29K Followers 3K Following Bioinformatics | (meta) genomics | Data science. Some politics. Views are all my own and do not represent past, current or future employer.
Elizabeth McKenna @ElizSMcKenna
18K Followers 5K Following Executive Editor of Cancer Discovery @CD_AACR, published by @AACR. @BBS_Harvard/@DanaFarber alum. Native New Yorker. Views/likes/RTs are my own. She/her
Rona Yaeger @RonaYaeger
726 Followers 167 Following GI Medical Oncologist, Physician Scientist at MSK. Tweets are my own.
Tanjina Kader 🎗️ @TanjinaKader
517 Followers 848 Following Post-doctoral Fellow, Laboratory of Systems Pharmacology (Santagata/Sorger Lab), Harvard Medical School | Previously Peter MacCallum Cancer Centre 🇦🇺
Hunter Shain @ShainLab
1K Followers 635 Following Associate Professor, Dermatology, UCSF. part of HTAN. Melanoma, skin cancer, single-cell, DNA/RNA-seq, spatial transcriptomics, cancer, dermatology, pathology
Farheen @farheen0003
7 Followers 83 Following
Mitchell Parker, MD, ... @Mitch_P
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Ronny Drapkin 🎗 @ronny_drapkin
2K Followers 931 Following Our lab @Penn focuses on the factors that drive ovarian tumorigenesis - It’s Totally Tubular! via @BrandeisU @RutgersU @BrighamWomens @DanaFarber
CIFAR @CIFAR_News
17K Followers 2K Following Convening the world’s most brilliant people to advance transformative knowledge and solve humanity’s biggest problems, together. FR: @nouvelles_CIFAR
Katy Borner @katycns
2K Followers 132 Following Engineer, Computer Scientist, Information Scientist, Science Mapper
Herbert Irving Compre... @columbiacancer
5K Followers 1K Following Updates on innovations in #cancer research, prevention, care, and education from the Herbert Irving Comprehensive Cancer Center at @columbiamed/@nyphospital.
Mario Suva @MarioSuva
3K Followers 378 Following Brain cancer biology. Single-cell genomics. Mass General Hospital. Broad Institute.
Janet Freeman-Daily @JFreemanDaily
5K Followers 2K Following Writer, speaker, science geek, cancer research advocate and activist. Living with ROS1+ lung cancer since 2011. Cofounder @ros1cancer, @IASLC STARS. #LCSM
Linghua Wang, MD, PhD @IamLinghua
2K Followers 716 Following Professor (Tenure) @MDAndersonNews • Single-Cell & Spatial Biology, Omics & AI • Team Science for Preventive, Predictive, Precision Oncology • Views mine
Minsoo Kim @minsoo_kim1
92 Followers 204 Following MSK Postdoc/PhD in Computational Biology & Medicine/Johns Hopkins
Groq Inc @GroqInc
82K Followers 631 Following Low-cost, high performance inference platform, powered by the Groq LPU. Delivering instant access to leading AI models with GroqCloud™.
Rick Lamers @RickLamers
6K Followers 700 Following 👨💻 AI Research & Engineering @GroqInc. Occasional angel investor. I publish technical resources about LLMs on Substack. Opinions are my own.
Front Line Genomics @FLGenomics
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Setor Amuzu @SetFelix
409 Followers 2K Following I help make sense of biological data #bioinformatics. Current interests: #cancer, #genomics, #PrecisionMedicine. :)
Emily Shaffer, DO @DrMissWV
2K Followers 3K Following AP/CP BC #CardiacPath #PulmPath Fellow 23-24 @NYUlangone In my past life, I was a beauty queen; my PGY life is far less glamorous.
Yize Li @YizeLi7
99 Followers 319 Following @WUSTLmed Cancer Genomics and Proteomics | Statistical Genetics | Multi-omics | Spatial Imaging | Bioinformatics
James Cleary @JamesClearyMD
2K Followers 822 Following Gastrointestinal Oncologist at @DanaFarber and @Harvardmed. Aspiring runner. @EinsteinMed, @RutgersU, and @StBenedictsNJ grad.
Break Through Cancer @break_cancer
2K Followers 376 Following Break Through Cancer is a foundation that empowers outstanding researchers and physicians to intercept the deadliest cancers.
Wungki Park, MD MS @CentralParkWMD
2K Followers 758 Following GI oncologist 🗽 @MSKCancerCenter 💜 #PancreaticCancer 💚#BiliaryCancer #trialist 🧬 #precision #oncology & 💊 #novel #therapeutics 🏃🏻♂️#steady #runner
GSK Women in Science @GSK_WiS
429 Followers 323 Following Women in Science @GSKGradSchool @sloan_kettering Instagram: @GSK_WiS @MSKcancercenter
ML4H @SymposiumML4H
3K Followers 73 Following Machine Learning for Health (ML4H) • San Diego, 2025 #ml4h2025 • Contact: [email protected] Follow us on Bluesky: https://t.co/c99yfcFHF4
James Zou @james_y_zou
16K Followers 120 Following @Stanford professor. Chan-Zuckerberg investigator. Sloan Fellow. Overton Prize. @togethercompute. AI for science + health.
Kevin (Yan-Ting) Chen @KevinYTChen
139 Followers 217 Following PhD candidate from the Vardhana Lab at Memorial Sloan Kettering Cancer Center. Interested in exploring how amino acid metabolism affect T cell biology
Devang Thakkar @devangvang
829 Followers 743 Following I walk and I make stuff - wood | code | design PhD Candidate, Computational Biology & Bioinformatics @DukeU Prev: Intern at @adaptivebiotech, BTech @iitbombay
Aaron Atkinson @AEAwasatch
258 Followers 3K Following Molecular diagnostics, genetics, and bioinformatics | @DHMC_CGAT | @Dartmouth | @GeiselMed | @UofUHealth - Clinical Genomics @Huntsmancancer
Ron Alfa @ron_alfa
3K Followers 2K Following CEO/Co-founder, @NOETIK_AI | Previously SVP, Head of Research @RecursionPharma $RXRX | @StanfordMed Neuroscience MD-PhD | @PDSoros | Build the Future
NOETIK @NOETIK_ai
1K Followers 47 Following Noetik is an AI-native biotech harnessing self-supervised learning to discover better precision immunotherapies.
Jake June-Koo Lee @jakelee0711
1K Followers 1K Following Physician Scientist @CompOncMSK and Thoracic Oncologist @MSKCancerCenter Historian of Cancer Genomes | Chromosome Biology | Therapy Resistance
Katie Link @katieelink
6K Followers 931 Following Machine learning for health @NVIDIA. Previously @huggingface, @nyulangone, @Google @theteamatx. Views my own.
Sasha Dagayev @SashaDagayev
385 Followers 2K Following Post about LLM AI, Arsenal, and NYCFC. Past: CEO @tinybio_ai, COO at Factorial Digital which was acquired by PowerDigital.
SEHI L’YI @sehi_lyi
397 Followers 262 Following Postdoc @Harvard (HCI, Data Visualization, Biomedical Informatics) · NIH K99/R00 Award · Co-creator of Gosling 🐥 (https://t.co/QLSmctltGZ)
Tinybio @tinybio_ai
44 Followers 12 Following Good software for scientists because scientists are people too.
María Bueno Álvez @_buenoalvez
186 Followers 602 Following 👩🏻💻 PhD student at @SciLifeLab / @KTHuniversity 🩸 Studying plasma proteome profiles in health & disease at @ProteinAtlas
Javi Lanillos @jlanillos
483 Followers 1K Following Bioinformatics and pharmacogenomics. Bring molecular data into the clinics :) Soon https://t.co/eGD2dGNHXy
Danny Postma @dannypostmaa
159K Followers 716 Following Founder of https://t.co/reapzFhWNK, building the future of photography. - Learn SEO 👉 https://t.co/3MOusGyAAb
Aditya Garg 🇮🇳 @aditygrg
508 Followers 841 Following Upcoming Engineering Intern @ Amazon | GSoC'23, Google Solution Challenge 2023, Walmart Sparkathon Finalist | Ex. Citi, Adbrew | Code and Cricket ❤️
Teng Gao @tGaoTeng
1K Followers 2K Following Postdoc @BostonChildrens @broadinstitute | Bioinformatics 🧬 PhD from @harvardmed. Using genomics to study hematopoietic stem cells in aging and regeneration
John Hickey @johnhickey22
638 Followers 128 Following Assistant Professor @ Duke Biomedical Engineering
Columbia - Irving Ins... @Cancer_dynamics
1K Followers 915 Following The Irving Institute for Cancer Dynamics (IICD) focuses on the interplay between mathematical sciences and cancer research @Columbia.
Caleb Lareau @CalebLareau
4K Followers 1K Following Assistant Professor at Memorial Sloan Kettering. Interested in computational and translational immunology. crazy cat guy. Same handle at the new place 🦋
Cancer Research @CR_AACR
6K Followers 282 Following The foundational, flagship journal of @AACR. Published since 1941.
Bo Wang @BoWang87
13K Followers 2K Following SVP and Head of Biomedical AI @Xaira_Thera; Associate Prof @UofT; Chief AI Officer @UHN; former PHD, CS @Stanford; opinions my own. #AI #healthcare #biology
The Cultural Tutor @culturaltutor
1.7M Followers 69 Following I've written a book, and you can get it here:
Sean Hanlon @SEHanlon
113 Followers 66 Following Lover of education, science, music, art, sports, . . . and lifeTrends for United States
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