suluxan @suluxanmohanraj
🧬👨🏾💻 @PughLab | 👨🏾🏫 @SenecaPoly crescent.cloud Toronto, Ontario Joined September 2018-
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🎉 Exciting News in Genomic Foundation Models! 🎉 Genetic variants (GVs) are key in diagnosing and treating genetic diseases. With the plummeting costs of next-generation sequencing, we now have a treasure trove of GV data. But this surge presents a challenge for clinicians: how…
Our multimodal model to combine TCR sequences with scRNA-seq is finally out. The most interesting part for me was observing a clear case where the combination of TCR sequence and cell state (RNA) preserved both clonotype and cell type information, leading to a more holistic cell…
Happy to have presented our Arbutus research cloud architecture supporting the @BrainCanada Single Cell Initiative 🧠 at DRI Connect ‘24 in Halifax. Thank you to @Alliance_Can, Jeff, John, and JJ for the opportunity to share our build from the researchers’ perspective! @PughLab
When I read a new foundation model paper for Biology
Researchers @TGHRI_UHN unveil an #AI model for analyzing data from single cells. Read about how this tool developed by @BoWang87 @HAOTIANCUI1 & @ChloeXWang1 has the potential to advance health research! Read more > uhnresearch.ca/news/generativ…; doi.org/10.1038/s41592…
As my lab develops Seurat, I wanted to share some thoughts on the important Seurat and scanpy package selection preprint from @Josephmrich/@lpachter 🧵
NEW FROM CBW: Introductory Spatial 'Omics Analysis 🧬🧠 Announcing a brand-new workshop offered in collaboration with @PanoramicsAV and the Brain Single Cell Initiative! - July 9-10 - Toronto AND online - $0 registration (yes, really!) More info: bioinformatics.ca/workshops-all/…
The choice of whether to use Seurat or Scanpy for single-cell RNA-seq analysis typically comes down to a preference of R vs. Python. But do they produce the same results? In biorxiv.org/content/10.110… w/ @Josephmrich et al. we take a close look. The results are 👀 1/🧵
The future of AI-driven drug discovery is natural intelligence. Today, we report EVolved Avian Natural Neural Networks (EVA-3N) - a breakthrough single-cell foundation model that unifies RNA, DNA and single cell language in an evolved 2B parameter general AI model 👇
And then they all got fired
And then they all got fired
Out today from the Stegle, Theis, and Moore labs! SpatialData is a user-friendly computational framework for exploring, analyzing, annotating, aligning and storing spatial omics data that can seamlessly handle large multimodal datasets. nature.com/articles/s4159…
Congratulations to Dr. Lillian L. Siu, who will become the 17th woman AACR president when she takes the gavel in 2025. Since the first woman scientist served as @AACR president in 1961, 17 women have been elected AACR president— including 10 of the last 23. @lillian_siu
Congratulations to Dr. Lillian L. Siu, who will become the 17th woman AACR president when she takes the gavel in 2025. Since the first woman scientist served as @AACR president in 1961, 17 women have been elected AACR president— including 10 of the last 23. @lillian_siu
🔬 Exciting News! Our manuscript, "scGPT: toward building a foundation model for single-cell multi-omics using generative AI" is now finally published in Nature Methods (@naturemethods) 🎉 !!! (Re-)Introducing scGPT: A transformative foundation model engineered for single-cell…
And for those still looking, remember that for there is a TCR for every antigen-MHC complex out there. Happy Valentine's.
UHNITED – our very first brand campaign, launches today! At @UHN, great minds from different disciplines come together to not only deliver the best care for our patients, but to also push the status quo of healthcare ➜ UHNITED.ca #UHNITED
Border agent: purpose abroad? Me: scientific conference. BA: topic? Me: single cell biology. BA: prokaryotic or eukaryotic? #reallyhappened
Happy Holidays to all young scientists, on the cover of the @NewYorker
Congratulations to Dr. Tak Mak! Tak has received the 2023 outstanding Achievements in Cancer Research award from the Canadian Cancer Research Alliance (@CCRAlliance). ccra-acrc.ca/ccra-awards/
Congratulations to Drs. Trevor Pugh (@PughLab), Raymond Kim @UHN and @DavidMalkin1 @SickKidsNews on their recent publication. Read the story here: bit.ly/3tIWEcr; On @AACR Cancer Discovery: doi.org/10.1158/2159-8…
Toronto is already a powerhouse in life sciences research because of the commitment of UofT, @UHN, @SickKidsNews, @CAMHnews , @Sunnybrook , @UnityHealthTO and other academic medical centres. Canadian government needs to step up its ambition and invest
Toronto is already a powerhouse in life sciences research because of the commitment of UofT, @UHN, @SickKidsNews, @CAMHnews , @Sunnybrook , @UnityHealthTO and other academic medical centres. Canadian government needs to step up its ambition and invest
Smeaul @SmeaulvrL4
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🔧 Ino de Bruijn �... @inodb
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Federico Gaiti @fgaiti
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Alaina Zachariah @Alainarichu
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Shirin Soleimani @SoleimaniShirin
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Jessica Soares @widowXCancer
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Elias Orouji @orouji
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421 Followers 410 Following We aim to accelerate the application of discoveries in cancer care through the fusion of human wisdom, data and technology. Our home is @pmcancercentre.
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5K Followers 3K Following City Councillor Candidate for Scarborough Rouge Park #antiracism #education #communitydevelopment Tweets are my own
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549 Followers 383 Following RadOnc resident @UofTDRO and genomic data scientist. @CancerResearch postdoc at @pmcancercentre. @PMGlobalCancer/@DKFZ Int'l fellow. #MDPhD alum from @UBC.
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Hillary Elrick @hbelrick
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The Centre for Comput... @CompMedicine
105 Followers 70 Following Core Facility within the SickKids Research Institute providing #computational expertise, #HPC resources, #Bioinformatics analysis & #MachineLearning consulting
arna @arnadanesh
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The CanDIG Project @distribgenomics
229 Followers 222 Following Connecting Canada's health genomics data to benefit researchers and families. Security, privacy, and federation of health research data.
Maz Riverin @MazRiverin
244 Followers 924 Following Founder - CIEL Homes & Condos 🌤 🏙 | CIEL Property Management 🤝 👨👩👧👧 | Broker - Right at Home Realty 🏡 🏢 🏗 #tech #realestate
uipof730 @uipof730
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Ping Luo @Ping5316
14 Followers 28 Following PhD | Postdoc at the Princess Margaret Cancer Centre | Machine Learning, Complex Network Analysis, Single-cell biology
Mariela Martinez @marielakfm
261 Followers 431 Following Cdn @NSERC_CRSNG PDF studying octos @UChicago. PhD @UofTCellSysBiol (@nakedmoleratlab, @MasseyCollege).
Kimberly Skead @KimSkead
372 Followers 655 Following PhD Candidate @OICR_news @awadallalab @UofT | Co-Founder @oicrRisingStars | Managing Fellow @reachAllianceTO | National Scientific Coordinator @weareCanPath
Nigel Marshall @MonteMonde
1K Followers 3K Following I have terminal brain cancer Sept '19... but to try make it difference! #Love #Family #FIGHT4LIFE #CANCER #grade4of4 #glioblastoma #WestonParkCancer #NHS #ART
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Malachi Griffith @malachigriffith
2K Followers 2K Following Professor, Department of Medicine and McDonell Genome Institute @ Washington University. Specializing in Bioinformatics, Genomics, and Cancer.
Ontario Institute for... @OICR_news
4K Followers 822 Following Bringing health and economic benefits to the people of Ontario through world-leading cancer research. Views expressed are those of OICR.
Marian Tang @mariantangg
28 Followers 52 Following Technical Analyst @PughLab, Princess Margaret Cancer Centre
Terry Fox Research In... @tfri_research
4K Followers 2K Following Working to make Terry's dream of ending cancer through research a reality. Proud leaders of the @MarathonOfHope Cancer Centres Network and the @DHDP_.
Cameron Kerr @CameronHKerr
82 Followers 67 Following Student Researcher at the Pugh Lab - Princess Margaret Cancer Centre
Pugh Lab @PughLab
1K Followers 471 Following Translational Cancer Genomics Lab | Dr. Trevor Pugh, PhD, FACMG | Single-cell Genomics. Immunogenomics. Cell-free DNA.
Lior Pachter @lpachter
47K Followers 2K Following Bren Professor of Computational Biology @caltech. Blog at https://t.co/FFQzhEsmhi. Tweets represent my views, not my employer's. #methodsmatter
Deena M.A. Gendoo @DGendoo
74 Followers 156 Following Associate Professor in #ComputationalBiology and #Bioinformatics with a #Cancer focus. Program Director of #MSc Bioinformatics. @unibirmingham.
Vector Institute @VectorInst
29K Followers 543 Following The Vector Institute is dedicated to AI, excelling in machine & deep learning research. AI-generated content will be disclosed. FR: @InstitutVecteur
Valli Subasri @vallisubasri
267 Followers 387 Following AI Scientist @pmcc_ai @UHN @VectorInst, previously PhD @sickkids @UofT ML for Healthcare | Computational Biology | Precision Medicine | Responsible AI
Alex Rosenberg @dna_rosenberg
2K Followers 628 Following CEO and cofounder at @ParseBio. Making single cell sequencing easier and more scalable
Haotian Cui @HAOTIANCUI1
223 Followers 511 Following Building virtual cell. Large models for drug discovery. CS Ph.D. @UofT.
ChloeXWang @ChloeXWang1
100 Followers 38 Following CS PhD student at the WangLab @ U of T. Working on ML applications in single-cell research.
Stephen Turner 🦋 @... @strnr
31K Followers 603 Following Assoc Prof & Dean of Research at UVA School of Data Science. Views my own. Mostly cross-posts from 🦋. Newsletter: https://t.co/qGepdBtVme.
Nature Methods @naturemethods
151K Followers 1K Following Nature Methods publishes cutting-edge methods, tools, analyses, resources, reviews, news and commentary, supporting life sciences research. Tweets by editors.
Shaf Keshavjee @SKeshavjee
3K Followers 78 Following Chief of Innovation, University Health Network, Director Toronto Lung Transplant Program, Professor of Thoracic Surgery Univ of Toronto.
Dr. Kevin Smith @KevinSmithUHN
12K Followers 385 Following President & CEO, University Health Network (@UHN). Professor, IHPME, Dept. of Medicine, Inst. of Medicine, RotmanSOM, University of Toronto
UHN AI Hub @UHNAIHUB
436 Followers 71 Following A Collaborative Centre at the University Health Network in Toronto designed to augment human intelligence through healthcare innovation.
UHN Foundation @uhnfoundation
5K Followers 982 Following Official foundation for @UHN Toronto General and Toronto Western hospitals, @TorontoRehab and @MichenerInst. Never been done is what we do.
Terry Fox Foundation @TerryFoxCanada
40K Followers 10K Following Terry Fox started a marathon against cancer. Together, we can Finish It.
The Nobel Prize @NobelPrize
1.2M Followers 497 Following The official feed of the Nobel Prize @NobelPrize #NobelPrize
Sage Bionetworks @Sagebio
5K Followers 710 Following Better Science Together | We are driving a new age of discovery through truly open science and radical collaboration.
🔧 Ino de Bruijn �... @inodb
621 Followers 2K Following building stuff for cancer genomics: @cbioportal @genomenexus
Dr. Jason Vassy @jasonvassy
7K Followers 2K Following Primary care physician and genomic medicine researcher @VABostonHC | Assoc Prof @HarvardMed | @BrighamWomens | @Genomes2People
gelareh-zadeh @gelarehzadeh
11K Followers 2K Following Chair & Prof, Dept of Neurological Surgery, Mayo Clinic Rochester William J and Charles H Mayo Professor @MayoClinic Editor-in-Chief @EditorNeuro https://t.co/vfVsF7kSpc
University of Toronto @UofT
128K Followers 2K Following #UofT is Canada's top university, transforming society by challenging the impossible. #UofTDefyGravity Find the latest news & events @UofTNews
Donnelly Centre @DonnellyCentre
3K Followers 584 Following Globally renowned interdisciplinary research institute at @UofT where scientists make discoveries to improve human health. Bluesky: https://t.co/mHjIcG1xAS
Federico Gaiti @fgaiti
926 Followers 2K Following Single-cell genomics, cancer biology & evolution | Scientist @PMcancercentre & Assistant Professor @UofT | @WeillCornell & @nygenome alumnus.
Lillian Siu @lillian_siu
2K Followers 595 Following Medical Oncologist, Princess Margaret Cancer Centre
Chris Mason @mason_lab
12K Followers 940 Following Professor of Genomics, Physiology, & Biophysics @WeillCornell Medicine. Co-Founder / COI @BiotiaNYC, @UrsaBio & @Onegevity (@thornehealth)
Ross Levine @rosslevinemd
10K Followers 2K Following Physician Scientist. All views expressed here are my own & do not represent my employer. COI:https://t.co/DEpEDKzb5w Also at @rosslevinemd.bsky.social
PANORAMICS - A Vision @PanoramicsAV
122 Followers 320 Following "Panoramics - A Vision" for a pan-Canadian collaborative working cluster for spatial and single cell multi-omics technologies & projects
Gary Bader @garybader1
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9K Followers 3K Following Brain Canada is a national non-profit organization that enables and supports excellent, innovative, paradigm-changing brain research in Canada. #BrainCanada
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Ming "Tommy" Tang @tangming2005
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Oxford Nanopore @nanopore
66K Followers 9K Following 🌍Direct DNA/RNA analysis for anyone, anywhere 🧬Short to ultra-long reads in real-time for rapid insights 🔬Products for research use only
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1K Followers 3K Following Senior lecturer at USyd Public Health | epidemiologist, egalitarian. Opinions my own
Shirin Soleimani @SoleimaniShirin
73 Followers 179 Following Graduate Student @UofT | TCR-sequencing @PughLab | Cancer Immunogenomics
🦋 shiffman.lol @shiffman
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Sohrab Shah @SohrabShah
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Filipa Torrão 🇵�... @Filipa_Torrao
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2K Followers 2K Following is committed to training the 'Next Generation of Scientists'! The Office of Research Trainees (ORT) is home to over 1400 students and postdoctoral researchers.
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CIHR @CIHR_IRSC
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PHD Comics @PHDcomics
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Uni of Birmingham @unibirmingham
136K Followers 1K Following Official account for the University of Birmingham. Changing how the world works. Online 9am-5pm Comment moderation policy: https://t.co/mdFP8hMddf
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The Alliance | L’Al... @Alliance_Can
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