Pranav Sampara @pranav_sampara

PhD student at the University of British Columbia. Wastewater treatment + process modeling + stable isotope probing + multi-omics Vancouver, British Columbia Joined May 2018

Tweets

33
Followers

94
Following

201
Likes

108

Elizabeth McDaniel @lizilla93

2 years ago

The enzymes for polyphosphate formation are present in nearly all bacteria, but only some store large amounts of polyP. Why? @ArcadiaScience we tackled this problem by looking at structural similarity of the protein catalyzing polyP formation 🧵 [1/12] research.arcadiascience.com/pub/result-ppk…

1 23 47 18K 10

ASM @ASMicrobiology

2 years ago

Stable isotope probing can be used to answer questions about complex microbial communities (e.g., who is active? Who is eating what?). In #mSystems, researchers present a standardized quantitative analysis strategy for stable isotope probing metagenomics. asm.social/1jW

0 39 80 13K 11

Download Image

Elizabeth McDaniel @lizilla93

3 years ago

There are now dozens of workflow managers for automating & scaling pipelines for biological data analysis. How do you pick one?! I wrote a perspective piece on how we made this decision @ArcadiaScience with some tips on how to choose one yourself 🧵[1/7] research.arcadiascience.com/pub/perspectiv…

5 39 148 30K 73

Ryan Ziels @RyanZiels

3 years ago

Are you interested in combining metagenomics with SIP? Here we validate a workflow for accurate and sensitive quantification of isotope incorporation at the genome level. An awesome collaboration w/ @pranav_sampara Rex Malmstrom Emiley Eloe-Fadrosh @simroux_virus and others @jgi

Cameron Thrash @jcamthrash

3 years ago

0 5 11 9K 6

4 22 63 8K 9

Pranav Sampara @pranav_sampara

3 years ago

If you are interested in modeling microbiomes, do come visit me today at poster 17.434. I will also pitch this poster in Auditorium B at 3:22 PM. Excited to talk about multi-omic approaches to resolve physiological traits of functionally degenerate organisms! @RyanZiels #ISME18

2 4 31 0 0

Download Image

bing.guo @bingGuo_lab

3 years ago

Lausanne is beautiful! Ready for #ISME18 My poster on Thursday session PS17.396 "Ecological modelling of microbial communities in engineering systems: microbial immigration and functional trait-defined heterotrophic guilds"

2 1 25 0 0

Download Image

Pranav Sampara @pranav_sampara

3 years ago

Excited to share our recent paper in @EnvSciTech where we calibrated a trait-based process model by resolving physiological traits of functionally degenerate Nitrospira using 'omics approaches and process modelling. Thanks @RyanZiels for all the guidance!

Ryan Ziels @RyanZiels

3 years ago

6 46 181 0 44

0 1 8 0 0

Ryan Ziels @RyanZiels

3 years ago

Are you interested in modeling microbiomes? Check out our new paper where we combine ‘omics with process modeling to resolve the kinetics of functional groups based on their physiological traits. This is a great milestone in @pranav_sampara’s PhD! doi.org/10.1021/acs.es… 1/

6 46 181 0 44

M.Cristina Gagliano @GagliaMC

3 years ago

Is finally online our work investigating the #salinity stress related pathways in the halotolerant #Methanothrix harundinacea, driving #anaerobic granulation at high salinity. Special thanks to @RyanZiels, @pranav_sampara and @jgi #microbiology journals.asm.org/doi/10.1128/ae…

2 8 25 0 2

Elizabeth McDaniel @lizilla93

4 years ago

Nice to come back from vacation to manageable manuscript reviews and a published paper. Happy to share the published version of co-first work with @fmoyaflores on metabolic differentiation of Accumulibacter in @mSystemsJ journals.asm.org/doi/10.1128/mS…

3 9 28 0 0

Karl Zimmermann @KarlZimmerman17

4 years ago

Please #share. #WEST Conference is a #free water conference happening this week, June 9- 11th and aims to unite water researchers from around the globe to learn #multidisciplinary approaches to water challenges. Register anytime before the event: west-conference.ubc.ca

UBC Future Waters @UBCFutureWaters

4 years ago

0 4 12 0 0

Download Image

0 8 10 0 0

Virginia Tech Civil and Environmental Engineering @VirginiaTechCEE

5 years ago

Amy Pruden has been named 2020 International Environmental Award winner for her work documenting antibiotic resistance genes as environmental contaminants. vtnews.vt.edu/articles/2021/…

1 11 63 0 0

Ryan Ziels @RyanZiels

5 years ago

An awesome student-organized seminar series that is free to all, and will be hosting exciting talks on water and the environment, from the likes of @LutRaskin @bio_fowler @TarpehDiem @MarkvLoosdrecht, and many other excellent researchers. Sign on up in link below!

Karl Zimmermann @KarlZimmerman17

5 years ago

1 12 20 0 1

Download Image

0 7 20 0 1

Karl Zimmermann @KarlZimmerman17

5 years ago

We're excited to announce the first #WESTalk seminar of 2021 by Dr. Raskin @LutRaskin from U. Michigan on Jan 14th at 9am PST (Vancouver time). Registration for the weekly #WESTalk is free at: eventbrite.ca/e/ic-impacts-w… #water @ICIMPACTS

Leili Abkar, Ph.D. @L_Abkar

5 years ago

0 1 4 0 0

0 2 6 0 0

Pranav Sampara @pranav_sampara

5 years ago

If you are at IWA Biofilms 2020, come hear me present our work :) Please checkout the details of my talk at: whova.com/embedded/speak…

1 0 8 0 0

Download Image

Joint Genome Institute @jgi

5 years ago

Among the accepted FICUS proposals that will avail of @EMSLscience @jgi @NEON_sci resources and capabilities is one from @RyanZiels and @HallamLab @UBC. More: bit.ly/32n59Zm! #microbiome @doescience @sciencePNNL @Battelle @UBCappscience @UBCscience

0 2 2 0 0

Download Image

Drew Wang @DrewWang5

5 years ago

3 Ph.D. students are sought to join my team for three multi-year wastewater resource recovery projects starting Spring 2021. Please kindly help me spread the words. Detailed information can be found at water.cee.vt.edu/positions/

3 44 60 0 1

Download Image

Hadley Wickham @hadleywickham

5 years ago

Are you Black, Indigenous, or a person of colour? If so, I'm holding open office hours this Friday: calendly.com/hadleywickham/…. I'm happy to chat, review #rstats code, give feedback on talks/papers/proposals, or do anything else that would be helpful to you.