Simon Roux @simroux_virus
Virus-obsessed 🇫🇷 bioinformatician, DOE JGI Scientist, Having fun with #metagenomics and other cool #omics. He/him. Opinions my own. simrouxvirus on bsky Oakland, CA Joined June 2017-
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Simon Roux retweeted
Ever wondered why some bacteria have multiple CRISPR-Cas systems? Our new study led by Leah Smith shows how type I CRISPR systems can promote the acquisition and retention of new spacers into a co-occurring type III system. sciencedirect.com/science/articl…
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Simon Roux retweeted
Thank you for being part of #ASMicrobe 2025—your energy & insights made it unforgettable! Save the date for ASM Microbe 2026, June 4–8 in Washington, D.C.! Session proposals open tomorrow—help shape next year’s program & advance the microbial sciences. asm.social/2tm
Simon Roux retweeted
Find me at @ASMicrobiology's ASM 2025 next week in LA! I'll have a (very fast!) talk in the sesson of @simroux_virus on Sunday, June 22 -- right before the posters! Can't wait to see friends at @MicrobiomeData and engorge myself on burritos
Simon Roux retweeted
Anyone have this?
Simon Roux retweeted
Interested in RNA virus discovery? You can still register for the RdRp summit and attend remotely! We'll have some really nice talks and cutting edge discussions on best practices and new directions in the field. rdrp.io
Simon Roux retweeted
New paper out where we highlight many newly recovered giant viruses and find new functional potential encoded in their genomes! #giantvirus #Bioinformatics nature.com/articles/s4429…
Simon Roux retweeted
We are hosting a workshop titled “Genomes Online Database (GOLD) – A curated metadata resource for powering discoveries” at the Biocuration 2025 conference on April 6th, 10:30 AM to 12:30PM US CST. Register to Join over the Zoom forms.gle/w8rZ4cP3D1rrY4…
Simon Roux retweeted
Excited to see this shout out from @NatureMicrobiol about our effort to crack open the field of phage functional genomics! @ben_a_adler
Excited to see this shout out from @NatureMicrobiol about our effort to crack open the field of phage functional genomics! @ben_a_adler
Simon Roux retweeted
Are you a student in need of guidance? Or a staff member or scientist eager to nurture the next generation of scientists? The ASM Future Leaders Mentorship Fellowship (FLMF) has a place for you. Learn more, check your eligibility and apply by March 26! asm.org/Fellowships/AS…
Simon Roux retweeted
Awesome project, and awesome people to work with! Great postdoc opportunity!
Awesome project, and awesome people to work with! Great postdoc opportunity!
Simon Roux retweeted
🚨 Exciting news! 🚨 ASM welcomes new Editors-in-Chief for our journals starting July 1! 👏 Join us in thanking our outgoing leaders & congratulating Romney Humphries, Marvin Whiteley, Ashley Shade and Ira Blader! Read more: asm.org/Press-Releases…
Simon Roux retweeted
New @AgileBioFoundry paper "The tier system: a host development framework for bioengineering" Current Opinion in Biotechnology. Chris Yeager, Katherine Wozniak, @vivek_mutalik, Christopher Johnson, Kyle Pomraning, Philip Laible, @taraka_dale, Adam Guss doi.org/10.1016/j.copb…
Simon Roux retweeted
Spolier: next episode will feature the recent approval of Phage Therapy in Portugal! Excited to share it with you all. Stay tuned 🙌
Simon Roux retweeted
A community-driven effort created the Genome Resolved Open Watersheds database (GROWdb), providing insights into the functional #Microbiomes of U.S. river systems. #EnvironmentalScience 📄 doi.org/10.1038/s41586… EVBC👤: @simroux_virus M. Sullivan
Simon Roux retweeted
A new study introduces the Modular Viromics Pipeline (MVP), a user-friendly tool for comprehensive viral genome analysis from metagenomic data, facilitating research in viral ecology. #Viromics #ViralGenomics 📄 doi.org/10.1128/msyste… EVBC👤: @simroux_virus
Simon Roux retweeted
Another one to watch: h3n3 influenzavirus bmcgenomics.biomedcentral.com/articles/10.11…
Simon Roux retweeted
In early 2022, I had an idea that seemed to merit a long-form treatment. But, was it possible to craft a narrative on the premise that exploring the absence of symptoms could help make sense of a global pandemic? I hope the result is of some service, now and moving forward.
Simon Roux retweeted
We have a fascinating preprint just out, revealing the widespread packaging of bacterial genomic DNA into capsids in the human gut:bit.ly/3B2ajza. Major denizens of the #microbiome implicated with broad potential impact on bacterial evolution and horizontal gene transfer
Simon Roux retweeted
Search your favorite protein sequences with Gaia🌎! We are excited to release a context-aware protein search tool, extending search and discovery capabilities beyond sequence and structure, to include *genomic context* gaia.tatta.bio 1/🧵
Search your favorite protein sequences with Gaia🌎! We are excited to release a context-aware protein search tool, extending search and discovery capabilities beyond sequence and structure, to include *genomic context* gaia.tatta.bio 1/🧵
Simon Roux retweeted
Nom nom viruses. Coastal bacteria and protists assimilate viral carbon and nitrogen academic.oup.com/ismej/advance-…
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Phage Directory @phagedirectory
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480 Followers 892 Following PhD student at UMCG | Gut virome & microbiome | Exposome | Computational Biology
CA High-Speed Rail �... @CaHSRA
30K Followers 1K Following 🏗 Building the US’s first 200+mph; 100% renewably powered #HSR 📍 SF↔️Central Valley↔️LA, 500+ miles, under 3⃣ hours ⚡️ & decarbonize transportation #BuildHSR
Villa Albertine @villa_albertine
16K Followers 2K Following Deepening connections between the US and the French-speaking world through art, ideas, and language. Powered by @franceintheus.
Daniel Portik @DPortik
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Gourav Arora @gourav_arora_g
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