Yang Shen @structbioinf
Educator and Researcher in Artificial Intelligence - Biological Intelligence Tweets are my own. RTs are not endorsements. Cambridge MA Joined November 2022-
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We are #hiring for Postdoctoral Associate in AI4Science at Texas A&M University. Message me if you're interested in joining our team. We are attending Conference on Neural Information Processing Systems (NeurIPS 2024) if you would like to meet! #NeurIPS2024
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Yang Shen retweeted
This paper was a collaborative effort from @marinkazitnik @_michellemli @aydin_wells @GysiDeisy @compbiologist @t_m_murali @pedjagogue @sroyyors @BaudotAnais @bozdags @kapil_devkota_ @anthonygitter @sargoshoe @PieHiram @Meng_CS @ziynet_ @koyuturkm @jmuiuc @xanderpico…
Yang Shen retweeted
Just published: "Current and future directions in network biology", a comprehensive review by leading experts in the field! Read it here: doi.org/10.1093/bioadv… #NetworkBiology #ISCB
Yang Shen retweeted
.@bozdags, Byung-Jun Yoon, @structbioinf, & I led the section on Machine Learning on Networks w/ contributions from Ziynet Nesibe Kesimoglu & @haiyuanyu. Thanks to @marinkazitnik for tons of input.
Taking a Deep Dive into Chemical Space, a symposium at #ACSfall2023 biosolveit.de/2023/06/23/acs…
It’s great to be back at MPI after almost five years, see many familiar faces again, and hearing great science progress in modeling of protein interactions! #MPI2023
70 years ago on the day of Apr. 25, a short but revolutionary paper was published. nature.com/articles/17173… Let's keep in mind the historic contributions from Watson, Crick, Rosalind Franklin and others. Happy National DNA Day!
Yang Shen retweeted
Finally, after ~6 years of work, this is published! genomebiology.biomedcentral.com/articles/10.11… Thanks to all my co-authors and the participants of the challenge for seeing this through.
Finally, after ~6 years of work, this is published! genomebiology.biomedcentral.com/articles/10.11… Thanks to all my co-authors and the participants of the challenge for seeing this through.
Yang Shen retweeted
It's frustrating reading comp bio articles these days because many keep falling into the same pitfalls. Hard to know if the method actually works, or whether they messed up the evaluation. Here are some issues I've seen recently (w/o names):
Yang Shen retweeted
11 ways ChatGPT saves me hours of work every day, and why you'll never outcompete those who use AI effectively. A list for those who write code: 1 of 16
Yang Shen retweeted
Multimodal learning of noncoding variant effects using genome sequence and chromatin structure biorxiv.org/cgi/content/sh… #biorxiv_bioinfo
Yang Shen retweeted
In two new papers we have found that the ESM2 language model generalizes beyond natural proteins, and enables programmable generation of complex and modular protein structures.
Great pleasure to introduce a new study on single sequence protein structure prediction rdcu.be/c1Ubu and share my views rdcu.be/c1UbO ! @SpringerNature @NatComputSci
Great pleasure to introduce a new study on single sequence protein structure prediction rdcu.be/c1Ubu and share my views rdcu.be/c1UbO ! @SpringerNature @NatComputSci
Great perspective on the field of protein structure prediction since #AlphaFold 2 and the winning solutions at #CASP15.
Great perspective on the field of protein structure prediction since #AlphaFold 2 and the winning solutions at #CASP15.
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