Tt_qian @BioQliu
Just like data visualization and plant epigenetics China Joined January 2018-
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Our #research on #drought #recovery, now published with @SpringerNature in @NatureComms: Drought recovery in plants triggers a cell-state-specific immune activation. Read thread below 👇 doi.org/10.1038/s41467…
Today was my last lecture for @MIT #ComputationalBiology: #Genomes, #Networks, #Evolution, #Health. I recorded each and immediately posted online here: youtube.com/playlist?list=… Please do share, and let me know which topics need more explanations, clarifications, and corrections!
🌈 Can the colors of plants do more than just please the eye? Deeper insights into the physiological and metabolic functions of the pigments in plants and their applications: beyond natural colorants bit.ly/45SBvNS
dTagを使ってクロマチン制御因子BRG1を何%減など細かく調整、量的変化の影響をATACやCUT&RUN、RNAseqなどで評価。量に比例する線形応答と、ある程度の減少を許容するバッファー応答型に分類されることを発見、Nat Genet誌。筆頭著者は卒業生でZ-Labに留学中の萩原くん㊗️ nature.com/articles/s4158…
Very excited to finally share the main findings from my PhD, now out as a preprint! We developed an epigenetic system to understand how plants remember and forget past infections - a phenomenon known as immune memory 🧠🌱🧬 Highlights below! 1/9 biorxiv.org/content/10.110…
🌶️ Why are some peppers bumpy? 🔬 Rugose surfaces form when epidermal cells lose organization, starting ~10 DPA. 🧬 Genes in microtubule dynamics & hormone signaling drive the trait. 📖 Yiqi Xie et al.🔗 brnw.ch/21wV3jK #Pepper #FruitTexture #Transcriptomics
New Article: "Microrchidia ATPases and DNA 6mA demethylase ALKBH1 act antagonistically on PRC2 to control chromatin structure and stress tolerance" rdcu.be/eBbLK MORCs stabilize PRC2 preferentially at bivalent domains to maintain high levels of H3 K27 trimethylation...
Tracing the evolution of sequencing into the era of genomic medicine. #Sequencing #GenomicMedicine #Review @NatureRevGenet nature.com/articles/s4157…
Introducing the 1,000 Flower Collection 🧬🌹 I’m creating 1,000 genetically designed flowers each crafted with new colors, patterns, and shapes. Here’s how I’m making it happen… and how you can join me on this journey 🧵(1/7)
In the latest issue! Bivalent chromatin instructs lineage specification during hematopoiesis dlvr.it/TMPrm8
Excited to see this published with additional data following our preprint a while back. Cool combination (in our biased view) of controlled TF expression and machine learning to decode chromatin sensitivity. sciencedirect.com/science/articl….
Excited to see this published with additional data following our preprint a while back. Cool combination (in our biased view) of controlled TF expression and machine learning to decode chromatin sensitivity. sciencedirect.com/science/articl…. https://t.co/Xh5FVf5q6U
This is how you can split a plot into multiple subplots using #tidyplots 🚀 #rstats #dataviz #phd
Retrograde signals control dynamic changes to the chromatin state at photosynthesis-associated loci nature.com/articles/s4146… @NatureComms
"Here we present the first direct evidence that H3K4me3 is not a cause but a consequence of transcriptional activation, functioning as a downstream epigenetic response" biorxiv.org/content/10.110…
I'll be joining the Department of Plant Biology at Michigan State University in Mid August as an Assistant Professor. cxli233.github.io/cxLi_lab/
🔬📊 Comment: A checklist for designing and improving the visualization of scientific data @NatureCellBio nature.com/articles/s4155…
井上班による成果がNature Structural & Molecular Biologyに掲載されました!🎉 H2A.Z reinforces maternal H3K4me3 formation and is essential for meiotic progression in mouse oocytes nature.com/articles/s4159…
SVbyEye: A visual tool to characterize structural variation among whole-genome assemblies academic.oup.com/bioinformatics… 🧬🖥️🧪 github.com/daewoooo/SVbyE…
Chromatin Accessibility Dynamics and Transcriptional Regulatory Networks Underlying the Primary Nitrogen Response in Rice Roots #resource #PlantCommunications cell.com/plant-communic…

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