Tara Bartolec @TaraBartolec

EIPOD-LinC postdoc fellow in the Savitski and Typas labs at EMBL, Heidelberg. #XLMS #proteomics #phage Mastodon: @[email protected] 🇦🇺🦠🧑‍🔬 Sydney, New South Wales Joined January 2016

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Typas Lab @TypasLab

2 months ago

Excited for New Approaches and Concepts in Microbiology 2025 (#EESMicrobiology) with sessions on Bacterial systems biology, Bacterial cell biology & protein machines, Microbiomes, Environment & evolution, Pathogenesis & phage, Antibiotic discovery, mechanisms, and resistance.

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Savitski Lab @savitski_lab

4 months ago

Want to know how the ligands interact with proteins beyond model human cell lines? Interested in membrane targets? Check out our High-Throughput PELSA method which allows you do all these cool screenings for dozens of ligands within 2 hours! biorxiv.org/content/10.110…

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Savitski Lab @savitski_lab

7 months ago

We are very happy to present our work on N-glycoproteomics!🍬 Our method enables the selective enrichment and precise quantification of intact N-glycopeptides to explore the dynamics of glycosylation microheterogeneity. nature.com/articles/s4159…

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Savitski Lab @savitski_lab

8 months ago

Exciting opening at the proteomics core facility at EMBL! Please spread, apply and reach out! embl.wd103.myworkdayjobs.com/EMBL/job/Heide…

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Savitski Lab @savitski_lab

9 months ago

New preprint - our latest close collaboration with @TypasLab @embl on phage-host interactions, led by @TaraBartolec, @KMitosch and Clément Potel. Mass spec revealed entirely unexpected, widespread proteome modification by a single phage protein kinase! biorxiv.org/content/10.110…

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Typas Lab @TypasLab

9 months ago

Excited to share our preprint with @savitski_lab led by @TaraBartolec, @KMitosch & Clément Potel! We uncovered a mechanism by which the T7 phage broadly counteracts DNA-targeting bacterial defenses by deploying a loose cannon kinase in its genome. @embl biorxiv.org/content/10.110…

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Nature Methods @naturemethods

10 months ago

.@theliulab @MRuwolt @diogobor @Milanzord @Absea_bio @Julia_RtaAn introduce a XL-MS standard based on human proteins or protein fragments produced in E. coli. The paper also introduces Scout, a search engine for XL-MS studies with cleavable cross-linkers. nature.com/articles/s4159…

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Max Ruwolt @MRuwolt

10 months ago

Our DSSO xlinked PPI benchmarking dataset (PXD042173) and Scout (github.com/diogobor/Scout) are finally published (nature.com/articles/s4159…)! Both Scout and the PPI dataset will grow. We and the whole XL community are working hard on refining XL search and FDR estimation.

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Joe Bondy-Denomy @joeBondyDenomy

10 months ago

Did you know that bacteria remember their past for many generations? In this new preprint from us (@VillaniAlexis and Senen Mendoza) and Banin lab (@ShmidovE ), we reveal the "how?" and "why?" underlying a long-standing mystery in bacterial memory. biorxiv.org/content/10.110…