Anders J. Skanderup @anders_js
Computational cancer genomics skandlab.org Genome Institute of Singapore Joined April 2010-
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✨Highlighting a @CD_AACR Special Issue Commentary for #AACR24: Precision Endpoints for Contemporary Precision Oncology Trials - by Regina Hoo, @drkevin_chua_lm, @pankajpanda86, @anders_js, & @danieltanmd doi.org/10.1158/2159-8…
Really clever approach to help understand the impact of broad copy number changes: Cancer aneuploidies are shaped primarily by effects on tumour fitness nature.com/articles/s4158…
Can AI help predict pancreatic cancer earlier? nature.com/articles/s4159… and hms.harvard.edu/news
Go cBioPortal ! Lots of new features for easy analytic access to cancer genomics, proteomics and more. Make your own discoveries on community-provided cancer data and analysis tools.
Go cBioPortal ! Lots of new features for easy analytic access to cancer genomics, proteomics and more. Make your own discoveries on community-provided cancer data and analysis tools.
PUREE is a weakly supervised machine learning algorithm that can accurately infer tumor purity from bulk tumor gene expression data: doi.org/10.1038/s42003… @anders_js, @RevkovEgor
Today our important study on air pollutants in the promotion of lung cancer has been published in @Nature led by @WillHilliam @LimEmilia @DrClareWeeden @SwantonLab ...Thread below🧵nature.com/articles/s4158…
#Fluoxetine (#Prozac) changes so many genes in so many brain regions. Mechanism(s) of action are dizzyingly complex, but some promising themes emerge👇. Long-term collab with @meaneylab et al. Large integrative omics study heroically led by @braincrank_nr. @astar_gis #depression
#Fluoxetine (#Prozac) changes so many genes in so many brain regions. Mechanism(s) of action are dizzyingly complex, but some promising themes emerge👇. Long-term collab with @meaneylab et al. Large integrative omics study heroically led by @braincrank_nr. @astar_gis #depression
Singapore scientists develop AI-based method to identify cancer mutations buff.ly/3pSJLaf
To update the classification system for #colorectal #cancer, the team analysed 373,000 #singlecells from 141 #tumour samples collected frm 63 patients in SG, BE, S KR. Read: clinicalresearchnewsonline.com/news/2022/08/1…
1 of the deadliest cancers with diverse etiological factors worldwide. We found unprecedented genomic diff. segregating distinctively across ethnicities & stressed the importance of differential disease biology & management in HCC across ethnicities. thno.org/v12p4703.htm
Our recent preprint trying to explore the tricky question of “blood microbiome”! Great work by an amazing intern in the lab @cedriccstan guided by @minghao_chia biorxiv.org/content/10.110…
Our recent preprint trying to explore the tricky question of “blood microbiome”! Great work by an amazing intern in the lab @cedriccstan guided by @minghao_chia biorxiv.org/content/10.110…
VarNet, a weakly supervised #deeplearning model for somatic #VariantCalling in cancer that does not require human-engineered features or heuristic filters #CancerResearch by @anders_js @kiran__chari et al. go.nature.com/3opGfDM
‼️ OUT TODAY @NatureGenet 📰 Single-cell and bulk transcriptome sequencing identifies two epithelial tumor cell states and refines the consensus molecular classification of colorectal cancer 🧑🏿🤝🧑🏼 @iaintan_mdphd @shyam_lab @astar_gis and colleagues 👇🏿 go.nature.com/3bI7ZA8
Excited to share our new study and resource on tumor metabolism with @rohatgineha @astar_gis. Using tumor transcriptome deconvolution, we identify metabolic differences of cancer and stromal cells inside tumors. Some expected and unexpected findings ... doi.org/10.1016/j.celr…
Those signatures that were reported in that amazing 18k WGS analysis paper in Science yesterday? They can all be browsed on the amazing Signal resource portal! signal.mutationalsignatures.com. 😎
Effective drug combinations in breast, colon and pancreatic cancer cells. 2025 drug combinations vs 125 cancer cell lines 😮nature.com/articles/s4158…
Wonderful portal that enables exploration of the phenomenal Hartwig metastatic cancer WGS/RNAseq cohort.
Wonderful portal that enables exploration of the phenomenal Hartwig metastatic cancer WGS/RNAseq cohort.
Collaboration with Sjoerd van Hagen, Sander Rodenburg and Elena Garcia Lara @TheHyveNL and Augustin Luna @canninl - more to come as CPTAC enters its next phase. Go proteomics in cancer profiling!
Collaboration with Sjoerd van Hagen, Sander Rodenburg and Elena Garcia Lara @TheHyveNL and Augustin Luna @canninl - more to come as CPTAC enters its next phase. Go proteomics in cancer profiling!
Excited that our paper is online! Highlights how pervasive lineage transition occurs at a transcriptomic level in T790M neg resistance, suggesting the potential for tissue-based integrative analysis to forecast resistance trajectories in EGFR M+ NSCLC. clincancerres.aacrjournals.org/content/early/…
New paper by @anders_js @GuanhuaPeterZhu @astar_gis shows that nucleosome-dependent degradation and 6 regulatory regions are predictive of #circulating #tumour #DNA burden throughout #cancer #progression #cancerResearch @NatResCancer go.nature.com/3uSbKYl
Jonathan Göke @JonathanGoeke
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A*STAR Genome Institu... @astar_gis
2K Followers 162 Following We are the national flagship programme for the genomic sciences in Singapore! Part of @astar_research. Follow us: https://t.co/UxzYTZAqB7
Gopal Iyer @DrGopalIyer
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Shyam Prabhakar Lab @shyam_lab
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Elizabeth McKenna @ElizSMcKenna
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Mari Miyamoto @marimiya_tky
2K Followers 3K Following General Manager APAC & Japan at Protein Metrics (Dotmatics). Amateur bird photographer. Comments here are my own. https://t.co/8tzcgxxf5M
Paul Gardner @ppgardne
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Alvin Ng @alvinwtng
591 Followers 1K Following Working in genomics & computational biology. Coffee geek. Experimentalist in the kitchen. Nocturnal baker. Views are my own.
Niranjan Nagarajan @NiranjanTW
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Swaine Chen @swaine_chen
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Shiva Karthick @shivakarthick99
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Nick Stein @maxx_healthspan
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Sribas Chowdhury @SeokjinS9954
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Lily @cr1raHKe22o446g
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Mitchell Parker, MD, ... @Mitch_P
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Pankaj Kumar Panda @pankajpanda86
529 Followers 684 Following Father to a 67-year old, Proton Therapy, Clinical Researcher, Craniofacial biology, Chef
Regina Hoo @reggie_hoo
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F. Betul Dincaslan @celligician
2 Followers 123 Following NUS, Biomedical Eng., PhD | Bilkent MBG (Single cell assays & data analysis) | (Zebrafish & tissue specificity) Looking for research opportunities
Vivienne Ji @vivienne83287
40 Followers 2K Following I need money, a lot of money. Even if I can make 1 dollar a day, I will try my best. If you have a way to make money, please tell me.
Komal Gupta @KomalGupta463
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Matthew N. McCall @matthewnmccall
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aru @arubikscube
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arindam007 @wannabe_ary
204 Followers 906 Following Post-Doc | Bioinformatics | NLP |Bacterial Phenotypes | Photographer | Traveller
Deepak Poduval @deepod87
11 Followers 402 Following
Benjamin Maier @b_d_maier
222 Followers 725 Following SysBio PhD student in the Petsalaki Group (Whole Cell Signalling) at EMBL-EBI (@emblebi) and Cambridge University (@Cambridge_Uni). Views are my own. he/him
Umar Ahmad (@babasara... @babasaraky
2K Followers 4K Following PhD | STO @AfricaCDC | global health, NGS, genomics, diagnostics, R&D, policy | bioinformatics-trained | Founder @OpenSciNigeria, @BioSeqc | @PLOSONE Editor
Reza @Reza_Ghamsari
363 Followers 2K Following Life-long learner| Looking for patterns in #AML within #BML lab @UNSW|based in @WEHI_research | #multiOmics #bioinformatics 💻🧬🧑🏻🔬🧑🏻🍳🏃🏻♂️🚴🏼♂️ 🛒
Alicia Oshlack @AliciaOshlack
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๑Ç̾๑,¸¸,¤º�... @cerago99
126 Followers 688 Following 🌎 neo-psychedelic computer scientist fairy #AI4Science
EleanorLin Lin @EleanornamesLin
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Anamika Yadav @anamikaa_yadav
36 Followers 460 Following
Noor Khehrah @KhehrahNoor
171 Followers 523 Following Marie Curie Fellow | EU Horizon 2020 | SFI | Onco-Immunology | Health Policy Making | Democracy
Dr Rupam Dutta, BVSc ... @DrRupamdutta
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Ludvig Olsen @LudvigOlsen
426 Followers 915 Following Postdoc at the Department of Molecular Medicine, Aarhus University Hospital @moma_dk https://t.co/yUknYTzyL0 https://t.co/zyUbpeW7fw
Marie Kirkelund @mlkirkelund
6 Followers 33 Following
Zheng Hu @huzheng1
1K Followers 1K Following Principal Investigator @ Shenzhen Institutes of Advanced Technology, CAS, China | Tumor evolution | Cancer phylogenetics | Single-cell lineage tracing
Gert Moelgaard @GMoelgaard
96 Followers 3K Following
Lakshmi Narayanan Lak... @lakshmi_res
5 Followers 22 Following Research fellow working in the area of Population genetics, analyzing large scale population datasets using machine learning methods in cloud.
Luciana Barnes @LucianaMSBarnes
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Bonface Odhiambo @bonface405
187 Followers 113 Following Biochemistry student, Egerton University Msc, Bioinformatics, Pwani University
Navin B. Ramakrishna @NavinBrian
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Marjan Naeini @mjtnaeini
160 Followers 325 Following Garvan Institute of Medical Research, Genomic Technologies group, Computational Biologist, PhD. Views are my own.
Kate Ivanova @Iva_Kate_Nova
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Prof Caroline Ford @DrCFord
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Tim Stuart @timoast
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Jonathan Göke @JonathanGoeke
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A*STAR Genome Institu... @astar_gis
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Shyam Prabhakar Lab @shyam_lab
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Elizabeth McKenna @ElizSMcKenna
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Nature Biotechnology @NatureBiotech
318K Followers 2K Following Publishing the best of biotech science and business. Find us on Bluesky, Facebook & Instagram. Part of @SpringerNature and @NaturePortfolio.
Niranjan Nagarajan @NiranjanTW
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Swaine Chen @swaine_chen
2K Followers 445 Following I'm a former professor in bacterial genetics and genomics. I also like math, technology. Views my own. @[email protected]
Alf @MacroAlf
464K Followers 310 Following CIO of https://t.co/evoEgFfdrz (Macro Hedge Fund) | Founder of The Macro Compass: Institutional Macro Research
ctDNA_DK @CtdnaDK
253 Followers 127 Following Dansk nationalt center for behandling vejledt af kræft-DNA i blodet. Centeret er en del af DCCC og støttet af Kræftens Bekæmpelse.
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Parker Institute for ... @parkerici
11K Followers 553 Following Our mission is to accelerate the development of breakthrough immune therapies to turn all cancers into curable diseases.
Mile Sikic @msikic
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B. Arman Aksoy @armish
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Chenhao Li @li_chenhao
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Big Data Genomics @bigdatagenomics
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Eivind Valen @eviledv
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nature @Nature
2.6M Followers 3K Following Research, News, and Commentary from Nature, the international science journal For daily science news, get Nature Briefing: https://t.co/wGmQlQ8a4D
troelsmarstrand @troelsmarstrand
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