Ruopeng Xie @RuopengX
Studying evolution and epidemiology of respiratory viruses of public health importance. #RGC PDFS @HKU_SPH #Phylodynamics #MachineLearning. Hong Kong Joined November 2020-
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Following159
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Likes180
Ruopeng Xie retweeted
Thrilled to share our latest preprint entitled "Emergence of a Novel Reassortant Clade 2.3.2.1c Avian Influenza A/H5N1 Virus Associated with Human Cases in Cambodia". #H5N1 #Cambodia #OneHealth #PublicHealth #GenomicSurveillance #Zoonosis #Influenza medrxiv.org/content/10.110…
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Ruopeng Xie retweeted
A @Nature paper reports major changes in the ecology and evolution of highly pathogenic avian H5 influenza viruses, including a shift in global distribution. The findings suggest that the epicentre of these viruses has extended beyond Asia to new regions. go.nature.com/3M1ZNKn
Ruopeng Xie retweeted
AMAZING STUDY ! How a single CROSS-INFECTION within HOTEL quarantine provoked one of the HIGHEST per-capita DEATH RATES of COVID-19 ? nature.com/articles/s4146… Fig. Epidemiological summary of SARS-CoV-2 from January to April 2022 in Hong Kong.
I am very grateful to the donors for this award. This would not have been possible without the help and support of my supervisor and colleagues ☺️
I am very grateful to the donors for this award. This would not have been possible without the help and support of my supervisor and colleagues ☺️
Ruopeng Xie retweeted
Genomic reconstruction of the astounding evolutionary changes that led to a drastic shift in global distribution (and therefore exposure risk) of avian influenza subtype H5 viruses in the past few years biorxiv.org/content/10.110…
Ruopeng Xie retweeted
New pre-print out: Global patterns and drivers of influenza decline during the COVID-19 pandemic medrxiv.org/content/10.110… We have used machine learning to analyse the influenza decline during Mar 2020-Sep 2021 by country-trimesters 1/8
Ruopeng Xie retweeted
Excited to see our work on "A Bayesian approach to infer recombination patterns in coronaviruses" published in @NatureComms nature.com/articles/s4146….
Ruopeng Xie retweeted
Distinguishing imported cases from locally acquired cases within a geographically limited genomic sample of an infectious disease Xavier Didelot @XavierDidelot, David Helekal @DHelekal, Michelle Kendall, Paolo Ribeca biorxiv.org/content/early/…
Ruopeng Xie retweeted
Our article with @vijay_lab @RuopengX on seasonal influenza circulation in mainland China since COVID-19 is out now in @Virus_Evolution and indexed on Google Scholar academic.oup.com/ve/advance-art…
Ruopeng Xie retweeted
Evolution, Transmission, and Pathogenicity of High Pathogenicity Avian Influenza Virus A (H5N8) Clade 2.3.4.4, South Korea, 2014-2016 dlvr.it/STYnlP
Ruopeng Xie retweeted
Deep learning from phylogenies to uncover the epidemiological dynamics of outbreaks dlvr.it/STTV4X
Ruopeng Xie retweeted
Spatial and temporal origin of the third SARS-CoV-2 Outbreak in Taiwan Jui-Hung Tai, Yu Ken Low, Hsin-Fu Lin, Tzi-Yuan Wang, You-Yu Lin, Charles Foster, Ya-Yun Lai, Shiou-Hwei Yeh, Pei-Jer Chen, Hurng-Yi Wang biorxiv.org/content/early/…
Ruopeng Xie retweeted
This article is making the rounds. Sounds scary, right? Constant reinfections and no immunity! Plague doctor! Forever plague!!! Too bad it is almost entirely poorly sourced, grossly misinterpreted, hyperbolic bullshit.
Ruopeng Xie retweeted
.@yatishturakhia will be giving the next talk Wednesday, July 20, 9:00 AM PDT on "Pandemic-scale phylogenetics", highlighting software packages UShER, matOptimize, RIPPLES and matUtils.
Ruopeng Xie retweeted
Comparing the evolutionary dynamics of predominant SARS-CoV-2 virus lineages co-circulating in Mexico Castelan-Sanchez, Delaye, Inward, Dellicour, Gutierrez, de la Vina, Pybus, Jauregui, Guzman, Garrido, Fontanelli, Rosales, Meneses, Olmedo-Alvarez et al biorxiv.org/content/early/…
Ruopeng Xie retweeted
Tools for Science by @arjunrajlab 📖How to write, how to give a talk, various specific things, etc. Link: 📎docs.google.com/document/d/1jB…
Ruopeng Xie retweeted
Epidemiological inference from pathogen genomes: A review of phylodynamic models and applications dlvr.it/ST9vzW
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Mehnaz Qureshi @qureshimeh
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Andrew Kern @pastramimachine
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Viruses MDPI @VirusesMDPI
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Kendrick Shih @kendrickshih
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Molecular Biology and... @MolBioEvol
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Mackaylia (Mack) 🦋 @JessieTG1997
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IDDjobs: infectious d... @IDDjobs
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