Robert Aboukhalil @RobAboukhalil
Co-founder at https://t.co/CtLwJkzyLm Creator of https://t.co/aT0F84k2c1 tutorials, https://t.co/nb8XvXQt5O cloud, https://t.co/jxzLuIr45j library robert.bio Mountain View, CA Joined April 2012-
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Robert Aboukhalil retweeted
while working on a soon-to-be opensourced project, I noticed @nvidia uses Nitro Bio's sequence viewer component!!
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Instead of making our own "day in the life of a bioinformatician" video, we used AI to do it for us, and the results made Maria laugh so hard she cried 😂 youtube.com/watch?v=zZuxTb…
💻 Just released a new tutorial: How to write a Bash script, featuring an IDE and a command-line running directly in your browser. No setup required. sandbox.bio/tutorials/bash…
Robert Aboukhalil retweeted
Wow, sandbox.bio now provides a tutorial for viral phylogenetics that you can run right in your browser 🙌 sandbox.bio/tutorials/vira… #microbinfie #bioinformatics #training via @RobAboukhalil
I always found that my resume doesn't do my experience justice, so a portfolio website can be a great visual way to show hiring managers all the good stuff I want them to see. I turned it into a GitHub template that you can copy for free: youtube.com/watch?v=KTRmfX…
📢 Excited to share new features on sandbox.bio: - Python playground to quickly test code - Customize how much RAM the command-line can use: 512MB, 1GB, 2GB (previously fixed at 1GB) - Confetti animations when you finish a tutorial 🙃
🦠 New tutorial on sandbox.bio: Learn to build phylogenetic trees from viral sequences, going from multiple sequence alignment to tree generation and rooting 🧬 💻 sandbox.bio/tutorials/vira…
We always tell people to create a portfolio to showcase their work. Today, we're releasing a template to get you started: github.com/omgenomics/por… It's for scientists and engineers who want a living resume of projects, work timelines, and blog posts that demonstrate expertise.
In 2024, sandbox.bio had >170,000 tutorial page views! 🥳 The most popular tutorials were: 1. Terminal basics 2. Genomic intervals with bedtools 3. Terminal exercises 4. Data exploration with awk 5. DNA sequencing QC Check them out here: sandbox.bio/tutorials
📢 Our first bioinformatics office hours were a lot of fun, so we will be hosting more of them this year! We will also invite special guests to co-host 👀 Join this Google Group to be notified when the next ones are: groups.google.com/a/omgenomics.c… (login with Google, then "Join Group")
Robert Aboukhalil retweeted
Good evening. I have a huge amount of fraud, waste, and abuse on my iPhone, so I’ve decided to specifically focus on eliminating “system data,” which represents less than 1% of “waste” and will cause crippling long-term effects
Robert Aboukhalil retweeted
We are hosting free bioinformatics office hours on Feb 19th at 10am-noon PST. Bring your bioinformatics career or technical questions, and @RobAboukhalil and I will try to answer them. Sign up here: tally.so/r/mOb6dM Please share especially with early career scientists!
🌲 New tutorial on sandbox.bio: Learn to build phylogenetic trees from closely related genomes using ska2. sandbox.bio/tutorials/ska2…
Ming "Tommy" Tang @tangming2005
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Aaron Quinlan @aaronquinlan
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Albert Vilella @AlbertVilella
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Torsten Seemann @torstenseemann
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Jason "boundless deli... @JasonWilliamsNY
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Ben Siranosian, PhD @BenSiranosian
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Jonathan Eisen @phylogenomics
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Daniel Portik @DPortik
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Barış Ekim @ekimbarisc
1K Followers 1K Following 🇹🇷. PhD student in algorithmic bioinformatics @lab_berger @MIT_CSAIL. Visiting @broadinstitute. Union rep @MITGradUnion. Tweets in TR/EN, views my own.
Elliot Hershberg @ElliotHershberg
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22 Followers 2K Following It's my fault if my girl gets angry This sentence is really enviable
Grupo de Estudos em G... @ggmuem
4 Followers 55 Following 📚🧬Grupo de Estudos em Genética e Melhoramento 📍Universidade Estadual de Maringá @oficialuem
𝗛𝗲𝗹𝗶𝗼 ... @Helioszjr
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Teja @sivateja1907
200 Followers 3K Following Love developing Android apps and exploring backend development, Flutter!
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Guy Yui Ngan @guyngan1
182 Followers 546 Following Postdoc @UnivCamPharm working with @psalmotoxin and naked mole-rat. Evolution, genomics, tRNA, biofilms, metagenomics, etc. Also on https://t.co/WbaVDPWSLX
Vicktor Vaughn @supa_vill_inc
279 Followers 6K Following
Abdul-Rahaman Abdalla... @ara_omaalae
120 Followers 3K Following Currently an MPhil Plant Breeding student, @KNUSTGH, Science Communication, Interest in Sorghum breeding and genetics.
Adri @adriirmf_
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Safak Kalindamar @sfkklndmr
57 Followers 547 Following Assistant Professor @ Ordu University // @Universiteege & @msstate_vetmed
Life in the Kali Yuga @frost__walker
315 Followers 3K Following My violent delights will have their violent ends.
Johan Van Weyenbergh @johanvawe
5K Followers 4K Following Researcher in #HTLV #HIV #NTDs respiratory viruses and vaccine response. 'Nothing in #human #immunology makes sense outside the light of #clinical #evolution'
Jean Marius Rakotondr... @jeanmarius1
222 Followers 2K Following Biostatistical and Biomathematical modeller, and Data Scientist. LinkedIn: https://t.co/Jqb4QkjhCN . PhD from @Sorbonne_Univ_
@Sparta4000 @amewoalordaniel
271 Followers 5K Following
Kang Wu @KangWu82336800
12 Followers 70 Following Maybe be passionate about bioinformatics, immunotherapy, and diagnosis, haha!
Sean Jungbluth @seanjungbluth
617 Followers 1K Following Metagenomics | Oceanography | Microbial Ecology | Big Data | Open Science | AI.
Dennis Prince @prince_dennis24
300 Followers 5K Following Christ disciple, passionate about youth empowerment, I love seeing people achieve their full potential. Medical researcher in phage biology.
Slearvough @Slearvough9UBS
130 Followers 6K Following
Alli McNeely @AlliMcNeely
115 Followers 164 Following seeking brilliant minds focused in web3, cryptography, blockchain, zk proofs - seek and ye shall find
The Mercenary @themercenary333
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Ming "Tommy" Tang @tangming2005
41K Followers 2K Following Director of bioinformatics at AstraZeneca. YouTube at chatomics. On my way to helping 1 million people learn bioinformatics. Also talks about leadership.
Michael Schatz @mike_schatz
16K Followers 1K Following Bloomberg Distinguished Professor of Computer Science and Biology at Johns Hopkins University
Vince Buffalo @vsbuffalo
16K Followers 3K Following Scientist at IDM. ♥s epidemiology, running, probability+statistics, 🦀, fly fishing, backpacking. Author of book Bioinformatics Data Skills. All views my own.
Nils Homer @nilshomer
5K Followers 669 Following Moved to Bluesky: https://t.co/KghbVUvbBg "So long and thanks for all the fish"
Vega Shah @dr_alphalyrae
18K Followers 4K Following AI for Life Sciences & Healthcare @NVIDIA | trained as a scientist from @JGI, @UW, @UCBerkeley | building global community @TechBi0 | views are all mine
Aaron Quinlan @aaronquinlan
17K Followers 1K Following All things genome mutation, software for genomic discovery. Chairperson of @UUGenetics Co-director, DELPHI Data Science Init (he/him) https://t.co/6GKjALLFfk
Torsten Seemann @torstenseemann
17K Followers 2K Following Microbial genomics, bioinformatics software, training. A/Prof ORCID: 0000-0001-6046-610X Retro 8-bit computers; VIC=20, C=64, C=128.
Jason "boundless deli... @JasonWilliamsNY
6K Followers 4K Following Asst. Dir. @DNALC @CSHL/ @CyVerseOrg /@thecarpentries/#AreciboC3/ #Foodie #ClassicalMusic #StarTrek /lifescitrainers.org —my own opinions.
Kevin K. Yang 楊凱�... @KevinKaichuang
21K Followers 6K Following Principal Researcher in BioML @MSFTResearch (@MSRNE). He/him/他. 🇹🇼
𝄃𝄃𝄂𝄂𝄀�... @the_yaniv
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Ben Siranosian, PhD @BenSiranosian
2K Followers 996 Following AI for design of computational therapies at Pattern Biosciences. Prev at Deep Origin, Loyal, Stanford Bhatt lab. MTBer, trail runner, biotech angel investor.
Daniel Portik @DPortik
2K Followers 3K Following Bioinformatics scientist @PacBio. I work on metagenomics, methylation, and assembly, but also enjoy phylogenomics and frog/lizard evolution. 🦠 🐸 🦎 🧬
Elliot Hershberg @ElliotHershberg
16K Followers 934 Following Partner @AmplifyPartners, writing https://t.co/LSbi0EEiHU
Phillip Compeau @PhillipCompeau
4K Followers 2K Following (Teaching) prof @CMUCompBio. Open ed founder: @Programming4Lvr, Rosalind, Bioinformatics Algorithms, Biological Modeling. It's a lotta goofies with a check
Cold Spring Harbor La... @CSHL
38K Followers 763 Following Non-profit research and educational institution at the forefront of molecular biology, cancer, neuroscience, plant biology, and genetics.
Phil Ewels @tallphil
2K Followers 180 Following Scientist, software developer and community builder. Product Manager for OSS at @SeqeraLabs. Projects: @nf_core, @MultiQC and @nextflowio.
Jason Chin @infoecho
4K Followers 2K Following Common thing in the following subjects: physics, computation, bioinformatics, systems bio., software, engineering? -- A curious mind. The opinions are my own.
European Reference Ge... @erga_biodiv
3K Followers 919 Following Biodiversity Genomics Community to generate reference quality genomes for all European species. https://t.co/jzc6OWEAkg
Aaron Francis @aarondfrancis
51K Followers 1K Following Sincere poster. No cynicism. Dad to two sets of twins! - https://t.co/yL0V3eZKDL - https://t.co/wIdhAlsrlX - https://t.co/hM9ogEIevT - @MostlyTechPod
Niko McCarty. @NikoMcCarty
37K Followers 1K Following Science. Biology. Progress. Founding Editor @AsimovPress / Subscribe!
Martin Smith @martinalexsmith
4K Followers 1K Following Genomics technocrat, Bioinformatics, RNA & Bash-Fu 🥷; Director @ramacgenomics ; Associate Prof. @UNSWBABS ; Member of @UNSWRNA
Timo Saratto (Moilane... @TimoSaratto
334 Followers 1K Following Genomics for pathogen surveillance, working on https://t.co/VLZkBGf9T7 and Solu Platform (@solu_bio)
Nae-Chyun Chen @naechyun_chen
567 Followers 645 Following Genomics x Software | @exaibio | @JHUCompSci and NTU (Taiwan) alum | Sports fan
Patrick Bohn @PatrickBohnPB
184 Followers 538 Following Interested in Nanopores, RNA and 3d printing - amphibious (wet and dry lab) Scientist
Matt McGuffie @matt_mcguffie
225 Followers 588 Following https://t.co/d09SLq4G8K Bioinformatics Lead at plasmidsaurus bacteriology, phages, plasmids, synthetic biology Not active here: https://t.co/AV6fh9uLDD
Yunha Hwang @Micro_Yunha
4K Followers 1K Following Building genomic intelligence, Asst Prof @MITBiology, @MITEECS, @MIT_SCC, Chief Scientist @tatta_bio https://t.co/gF8HeJo5hU
Nishant Jha @parambulat0r
155 Followers 274 Following Software engineer based in Pasadena, CA. My work serves research scientists at the bench and the keyboard. https://t.co/4I8hH8cyR8
Nezar Abdennur @nv1ctus
598 Followers 410 Following computational biologist / biological computer / asst prof @UMassChan / phd @MIT / https://t.co/Sv8B6sBNdS
Furkan M. Torun @furkanmtorun
860 Followers 51 Following 🧬 Researcher and Data Engineer @ExactSciences 🧪 𝗱𝗲𝗯𝘂𝗴𝗴𝗶𝗻𝗴 𝗗𝗡𝗔 𝘀𝗼𝗳𝘁𝘄𝗮𝗿𝗲!
Mark Budde 🦕🏆 @markwbudde
4K Followers 3K Following Co-founder & CEO - Plasmidsaurus 🦕🦖🧬 The only real DNA Sequencing as a Service company
Matthew Parker @bioinfomatt
1K Followers 816 Following HCPC Registered Clinical Bioinformatician. Director, Clinical Bioinformatics Software @nanopore. Views are my own.
Greg Jordan @gjuggler
240 Followers 295 Following Cofounder of @paperpile. Comp bio Ph.D. @emblebi turned software engineer. Prev @google, @verily.
Samuel Lampa - shl@ge... @smllmp
2K Followers 2K Following Clinical Micro #Bioinformatics @ Karolinska Hospital | PhD alum https://t.co/AaTZ9rG1sY | Systems, Reproducibility, #SciWorkflows | Married, Dad, Sinner Saved by Grace
Zamin Iqbal @ZaminIqbal
9K Followers 7K Following Professor of Algorithmic and Microbial Genomics at the University of Bath. Pathogens, genomics, genome graphs, antibiotic resistance, algorithms,data structures
Helene Chiapello @HeleneChiapello
538 Followers 898 Following #bioinformatician at @INRAE_France @INRAE_dpt_MICA @INRAE_MaIAGE @INRAE_Migale, co-coordination of #training at @IFB_Bioinfo
Chris Seymour @iiSeymour
2K Followers 799 Following VP Advanced Platform Dev, Software, ML @nanopore
Ankur Parikh @ank_parikh
3K Followers 4K Following Staff Research Scientist at Google DeepMind. Former adjunct assistant prof at @NYU_Courant. PhD at @mldcmu. ML for Bio/Chem (Prev. NLP). All opinions my own.
Clay McLeod @claylmcleod
278 Followers 157 Following Director of Product Development and Engineering at St. Jude building the pediatric cancer data ecosystem, St. Jude Cloud (https://t.co/jZNsCUnyqZ).
Wei Shen 沈 伟 @shenwei356
2K Followers 1K Following Associate professor of Bioinformatics at Chongqing Medical University, China. Lab: https://t.co/67yy7iIrgx Personal: https://t.co/E5GOnSMIRW https://t.co/mXnnqslpi1
Steven Weaver @stvnwvr
278 Followers 210 Following All about software development and biotech. Dick's Last Resort Downtown San Diego 2003 Jelly Donut Eating Contest Champion. San Diego born/raised. #firstgen
Sergei Pond @sergeilkp
2K Followers 697 Following Dad. Husband. Born/raised Kyiv. Developer of @hyphy_software. Former mathematician, current professor of biology at Temple U. Google scholar: https://t.co/qyzpbkE1qZ
Jesse Johnson @jejomath
1K Followers 526 Following Helping biotechs unblock their data scientists to work on what they were hired for at https://t.co/PfwhQa2jFR Writing about it at https://t.co/FgP2rWLXKB
trevor manz @trevmanz
1K Followers 609 Following building @marimo_io, creator of https://t.co/KgiT9Ti5Wn prev data vis @harvard, comp bio @cambridge_uni
🧬Jacob L Steenwyk @jlsteenwyk
5K Followers 2K Following Omics & Software Eng 🧬👨🏽💻 | UC-Berkeley 🐻👨🏽🔬 | Current LSRF HHMI Awardee🎓 | HHMI Gilliam Alum🧑🏽🎓
Paul Masset @paul_masset
1K Followers 1K Following Assistant Professor @mcgillu Affiliate Member @Mila_Quebec | Neuroscience and AI, learning and inference, dopamine and cognition
LifeSciTrainers @LifeSciTrainers
345 Followers 387 Following A global community for short-format training in the Life Sciences. https://t.co/Z5zQ3cko4F
ECO @eColi_virus
209 Followers 174 Following High scale NGS operations #Invitae #Variantyx. Founder of SEQanswers. Loves long walks in the genome, and his mom.
Theo Sanderson @theosanderson
13K Followers 1K Following (increasingly on bluesky, @theo.io) Assistant professor @LSHTM working on viral genomics. Previously: @TheCrick, @GoogleAI, @sangerinstitute 🧪 🤖 🖥️
Genome in a Bottle @GenomeInABottle
3K Followers 280 Following The Genome in a Bottle Consortium develops reference materials, reference data, and reference methods needed to benchmark human genome sequencing
plasmidsaurus @plasmidsaurus
11K Followers 10K Following Pioneers in the sequencing of whole plasmids, amplicons, whole bacterial genomes & more. 900+ dropboxes and 10 labs globally.
Yohann Potier @ypotier
148 Followers 2K Following data @TesseraTx. Distracted from distraction by distraction.
Rob Syme @robsyme
667 Followers 963 Following @[email protected] Open data, open science, workflows, @nextflowio and bioinformatics @seqeralabs. Molecular biology bioinformatics. Novice human. He/him
Timothy Stiles @TimothyStiles
3K Followers 2K Following Building the world's most modern, open source, software library for genetic engineering. https://t.co/2QktmNwjOg…
Joseph Cammarata @Joesophila
257 Followers 228 Following Postdoctoral researcher with the Strader lab, formerly PhD student at Cornell University. Plant hormones rock!
Pierre Poulain @pierrepo
2K Followers 1K Following Associate prof @univ_paris_cite #bioinformatics @SfbiFr #python #openscience @SWHeritage ambassador #pedagogy 🦣 @[email protected]
Jeremy Goecks @jgoecks
756 Followers 722 Following Assistant Center Director, Research Informatics; Faculty Member, Depts. of Machine Learning + Biostats/Bioinform @MoffittNews @ml4onco @galaxyproject @useAnVIL
Tom Kelly ケリー�... @tomkXY
3K Followers 3K Following Kiwi. Dad. Bioinformatician. Data Evangelist. Survived 7 years in Japan. Fun at Parties. @otago PhD. All opinions my own. #Rstats #genomics #autistic
Jeremy Leipzig @jermdemo
2K Followers 2K Following Bioinformatics engr & pop gen product mgmt. O'author, PhD, 4x startup survivor. Pipelines, metadata, genomics, reproducible research. Gen X.
Sara Simmonds 🧬 @SeSimmonds
713 Followers 726 Following Staff Computational Biologist @cziscience | PhD Biology | Follow for the latest in #compio related to #cellbio #AIxBioTrends for United States
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