Prosad Kumar Das (he/him) @_SazAbad
Computationally versed biologist @IGIBSocial, @iiserkol alumnus | CRISPR | genomics | Ambivert | Nyctophile Joined November 2020-
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Prosad Kumar Das (he/him) retweeted
Controlling the forces needed to move around is pretty complicated for soft-bodied organisms. Researchers have implemented a new technique for measuring these crawling forces with nanonewton precision in fruit fly larvae. elifesciences.org/articles/87746…
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Prosad Kumar Das (he/him) retweeted
Great to be back in the field doing some @nanopore eDNA work using our @theBentoLab! This time we’re in Jersey, part of the @ConvexSeascape, looking for the origins of blue carbon input.
Prosad Kumar Das (he/him) retweeted
Unravelling differential Hes1 dynamics during axis elongation of mouse embryos through single-cell tracking biorxiv.org/cgi/content/sh… #bioRxiv
Prosad Kumar Das (he/him) retweeted
A multi-tissue de novo transcriptome assembly and relative gene expression of the vulnerable freshwater salmonid Thymallus ligericus biorxiv.org/cgi/content/sh… #bioRxiv
Prosad Kumar Das (he/him) retweeted
Our work on the origins of second malignancies in children is out in Cancer Discovery @IRBBarcelona @bbglab @IRSJD_info doi.org/10.1158/2159-8… 1/16
Prosad Kumar Das (he/him) retweeted
Growing glowing plants!
Prosad Kumar Das (he/him) retweeted
#Galactose is an important sugar that can fuel glycolysis, but tracking its metabolic dynamics in vivo is challenging. @Yoo_Lab_RIKEN describe #GALDAR, a genetically encoded sensor to measure intracellular galactose dynamics in flies #PLOSBiology plos.io/3Vx63iO
Prosad Kumar Das (he/him) retweeted
only that Fig. 6 actually ends up being Fig. 1 ...
only that Fig. 6 actually ends up being Fig. 1 ...
Prosad Kumar Das (he/him) retweeted
Some drugs increase the #mutation rate of their target #pathogen, raising the concerns they might increase the pathogen’s rate of adaptation. This #PLOSBiology Perspective proposes a four-step process to evaluate the evolutionary safety of new treatments. plos.io/491R2sq
Prosad Kumar Das (he/him) retweeted
New paper from our group: we show that PCR, not sequencing, is the main source of error in bulk and single-cell expts and we correct these experimentally using UMI homoblock design. nature.com/articles/s4159…
Prosad Kumar Das (he/him) retweeted
Excited to share our recent findings on VEGFR1 autoinhibition. Thanks to Molecular signaling lab @SwarnenduRoy10 @SubhankarC20, soumee, Bipra, @sayargh_ @KaustavGanguly1 special thanks to @DasDiptatanu, pragya kaul,@_SazAbad nature.com/articles/s4146…
Prosad Kumar Das (he/him) retweeted
The Sea Lamprey may be a monstrous-looking sea creature, but it’s also an incredible organism for studying how the #brain evolved! 🧠 #biology #evodevo Learn more about these #UnordinaryOrganisms: bit.ly/3V5YXyA
Prosad Kumar Das (he/him) retweeted
Just released a BLAST tutorial on sandbox.bio! Learn to align DNA and protein sequences on the command line: ➡️ sandbox.bio/tutorials/blas… This tutorial was adapted from @shawntoneil's fantastic book.
Prosad Kumar Das (he/him) retweeted
E. coli engineered to become stem cells that differentiate! We prevent take-over by mutant stem cells that only self renew - by linking differentiation to an essential function. A new way to engineer stable microbial communities. sciencedirect.com/science/articl…
Prosad Kumar Das (he/him) retweeted
In an era of RNA delivery and therapeutics, we sought to “write” RNA molecules directly into messenger RNA to replace disease-causing exons or engineer synthetic proteins Our new work on RESPLICE enables fully programmable and highly efficient (45-90%) transcriptome engineering
Prosad Kumar Das (he/him) retweeted
Transposons FTW...yet again! The more we discover about these "junk" elements...the more actual gold we find. Super cool findings from Patrick's lab!
Transposons FTW...yet again! The more we discover about these "junk" elements...the more actual gold we find. Super cool findings from Patrick's lab!
Prosad Kumar Das (he/him) retweeted
Humans are one of the few mammals that have both red and green cones. A stochastic gene regulatory mechanism was the main model in the field. @hadyniaks in my lab changed the view, finding that retinoic acid controls their spatiotemporal patterning. journals.plos.org/plosbiology/ar…
Prosad Kumar Das (he/him) retweeted
Excited to share the published version of this in @MolBioEvol! Elena Romero developed an approach to quantify recombination from longitudinal short read sequencing, and applied it to measure differences in recomb rate in HIV pops with low and high VL. academic.oup.com/mbe/article/41…
Excited to share the published version of this in @MolBioEvol! Elena Romero developed an approach to quantify recombination from longitudinal short read sequencing, and applied it to measure differences in recomb rate in HIV pops with low and high VL. academic.oup.com/mbe/article/41…
Prosad Kumar Das (he/him) retweeted
I’m in a plane reading about infinity categories to pass the time and I think I want to jump out of it.
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